Ss1.1-Pig3-SRG8016G05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGAAAATGCTGAGGAAAGGAAGGCGACCAAAGAGACCGTTCATAGGAGTCCCTATAGCCC CGCAGCAACGGTCAGATTAATTTAAAACAGTTGATAGCAAAGAAGATACAATTGACAGCA GAGGCAGAGGAATTGAAGCCCTTTTTTATGAAGGAAGTTGGCAGTCACTTTGATGACTTT GTGACCAATCTCATTGAAAAATCTGCCTCATTAGACAATGGTGGCTGTGCTGTCACATCC TTTTCTGTCCTTGAAGGAGAGAACAACCACAGGGCGAAAGATCTGCGAGCACCTCCAGAA CATGGAAAGATTTTTGTTATAAGGGGATCAAACCTCATGGTTCCTAGTGAGGTGGACCAC ATCAGAACAATATATCACATGTTCTCCCACCCTAAATTTAATGCCCAGTTTGGAAATCAA TAGATAAAATTGATCGTCTTATGCTAGTAGGGAGGCTGTCCAATCTATATAATTTACTAA ATCCTTAATAACATTTCCTTTTTCCCCTATAAAATATGAAGGCTTTTTAAAACATCTGTA ACTTGTTTCTATACTGCTTTTTTTTTAAAATGCTTTCCTCATATCTACATTATGACATTC ACATTTTTGTTGTCAACATACCCTTCCCAGTGGAGTTTAGCCTTTAAGCTAGCAGATACT TGACCATGCTTTGTGGTGTTCTTTTGTTTGTTTTAATGAAGTGATAGGTATACTTGGTTT TAAATAACTTTGCGTTTGATAATGGTTTACTGCACCCAGTTGCTTATGGATGCAATTTGA ATTCCCATGTGCAAACCTGACACTTGCCCAGTGGGATGAGAACTCAAGCCTTATCCAATG CTCTGCCATTTGGGCCAGAGCAACAGCTTCCTTCCTGTGGCAGTACCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGAAAATGCTGAGGAAAGGAAGGCGACCAAAGAGACCGTTCATAGGAGTCCCTATAGCCC CGCAGCAACGGTCAGATTAATTTAAAACAGTTGATAGCAAAGAAGATACAATTGACAGCA GAGGCAGAGGAATTGAAGCCCTTTTTTATGAAGGAAGTTGGCAGTCACTTTGATGACTTT GTGACCAATCTCATTGAAAAATCTGCCTCATTAGACAATGGTGGCTGTGCTGTCACATCC TTTTCTGTCCTTGAAGGAGAGAACAACCACAGGGCGAAAGATCTGCGAGCACCTCCAGAA CATGGAAAGATTTTTGTTATAAGGGGATCAAACCTCATGGTTCCTAGTGAGGTGGACCAC ATCAGAACAATATATCACATGTTCTCCCACCCTAAATTTAATGCCCAGTTTGGAAATCAA TAGATAAAATTGATCGTCTTATGCTAGTAGGGAGGCTGTCCAATCTATATAATTTACTAA ATCCTTAATAACATTTCCTTTTTCCCCTATAAAATATGAAGGCTTTTTAAAACATCTGTA ACTTGTTTCTATACTGCTTTTTTTTTAAAATGCTTTCCTCATATCTACATTATGACATTC ACATTTTTGTTGTCAACATACCCTTCCCAGTGGAGTTTAGCCTTTAAGCTAGCAGATACT TGACCATGCTTTGTGGTGTTCTTTTGTTTGTTTTAATGAAGTGATAGGTATACTTGGTTT TAAATAACTTTGCGTTTGATAATGGTTTACTGCACCCAGTTGCTTATGGATGCAATTTGA ATTCCCATGTGCAAACCTGACACTTGCCCAGTGGGATGAGAACTCAAGCCTTATCCAATG CTCTGCCATTTGGGCCAGAGCAACAGCTTCCTTCCTGTGGCAGTACCT |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 128-278, gnl|bosTau2|chr16 (46378748-46378898) | |
| 128-278, gnl|canFam2|chr7 (23467418-23467241) | |
| 128-278, gnl|dasNov1|scaffold_15485 (76674-76495) | |
| 128-278, gnl|echTel1|scaffold_318115 (50271-50451) | |
| 128-278, gnl|hg17|chr1 (176036275-176036454) | |
| 128-278, gnl|Hg17|chr1 (176036296-176036449) | |
| 128-278, gnl|loxAfr1|scaffold_41346 (11876-12057) | |
| 128-278, gnl|mm7|chr1 (156409320-156409141) | |
| 128-278, gnl|Mm7|chr1 (156409297-156409144) | |
| 128-278, gnl|monDom2|scaffold_16 (32141518-32141697) | |
| 128-278, gnl|oryCun1|scaffold_172961 (3773-3952) | |
| 128-278, gnl|panTro1|chr1 (158430105-158430284) | |
| 128-278, gnl|rheMac2|chr1 (191414325-191414146) | |
| 128-278, gnl|rn3|chr13 (71449422-71449243) | |
| 128-278, gnl|xenTro1|scaffold_236 (805581-805417) | |
| 386-496, gnl|bosTau2|chr16 (46398705-46398819) | |
| 386-496, gnl|canFam2|chr7 (23448670-23448273) | |
| 386-496, gnl|dasNov1|scaffold_1365 (32042-32413) | |
| 386-496, gnl|hg17|chr1 (176058727-176059162) | |
| 386-496, gnl|Hg17|chr1 (176058812-176058921) | |
| 386-496, gnl|mm7|chr1 (156388010-156387610) | |
| 386-496, gnl|panTro1|chr1 (158452411-158452859) | |
| 386-496, gnl|rheMac2|chr1 (191390613-191390158) | |
| 524-702, gnl|bosTau2|chr16 (46398899-46399083) | |
| 524-702, gnl|canFam2|chr7 (23448670-23448273) | |
| 524-702, gnl|dasNov1|scaffold_1365 (32042-32413) | |
| 524-702, gnl|hg17|chr1 (176058727-176059162) | |
| 524-702, gnl|Hg17|chr1 (176058999-176059197) | |
| 524-702, gnl|mm7|chr1 (156388010-156387610) | |
| 524-702, gnl|panTro1|chr1 (158452411-158452859) | |
| 524-702, gnl|rheMac2|chr1 (191390613-191390158) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 128-278, gnl|bosTau2|chr16 (46378748-46378898) | |
| 128-278, gnl|canFam2|chr7 (23467418-23467241) | |
| 128-278, gnl|dasNov1|scaffold_15485 (76674-76495) | |
| 128-278, gnl|echTel1|scaffold_318115 (50271-50451) | |
| 128-278, gnl|hg17|chr1 (176036275-176036454) | |
| 128-278, gnl|Hg17|chr1 (176036296-176036449) | |
| 128-278, gnl|loxAfr1|scaffold_41346 (11876-12057) | |
| 128-278, gnl|mm7|chr1 (156409320-156409141) | |
| 128-278, gnl|Mm7|chr1 (156409297-156409144) | |
| 128-278, gnl|monDom2|scaffold_16 (32141518-32141697) | |
| 128-278, gnl|oryCun1|scaffold_172961 (3773-3952) | |
| 128-278, gnl|panTro1|chr1 (158430105-158430284) | |
| 128-278, gnl|rheMac2|chr1 (191414325-191414146) | |
| 128-278, gnl|rn3|chr13 (71449422-71449243) | |
| 128-278, gnl|xenTro1|scaffold_236 (805581-805417) | |
| 386-496, gnl|bosTau2|chr16 (46398705-46398819) | |
| 386-496, gnl|canFam2|chr7 (23448670-23448273) | |
| 386-496, gnl|dasNov1|scaffold_1365 (32042-32413) | |
| 386-496, gnl|hg17|chr1 (176058727-176059162) | |
| 386-496, gnl|Hg17|chr1 (176058812-176058921) | |
| 386-496, gnl|mm7|chr1 (156388010-156387610) | |
| 386-496, gnl|panTro1|chr1 (158452411-158452859) | |
| 386-496, gnl|rheMac2|chr1 (191390613-191390158) | |
| 524-702, gnl|bosTau2|chr16 (46398899-46399083) | |
| 524-702, gnl|canFam2|chr7 (23448670-23448273) | |
| 524-702, gnl|dasNov1|scaffold_1365 (32042-32413) | |
| 524-702, gnl|hg17|chr1 (176058727-176059162) | |
| 524-702, gnl|Hg17|chr1 (176058999-176059197) | |
| 524-702, gnl|mm7|chr1 (156388010-156387610) | |
| 524-702, gnl|panTro1|chr1 (158452411-158452859) | |
| 524-702, gnl|rheMac2|chr1 (191390613-191390158) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sug (0.127291) |