Ss1.1-Pig3-SRG8016O11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGCCGAATTCCTTCAGGTGCCGGCGGTGACGCGGACCTACACCACGGCGTGCGTCCTC ACCACGGCCGCGGTGCTGGAGTTCCTCATCCCCTTCCAGCTCTACTTCAACCCGCACCTC GTGTTCCGGAAGTTCCAGGTCTGGAGGCTCGTCACCAACTTCCTCTTTTTCGGGCCCATG GGATTCATCTTCTTCTTCAACATGCTCTTCGTGTTCCGCTACTGCCGAATGCTCGAGGAG GGCTCCTTCCGCGGCCGCACAGCAGACTTTGTCTTCATGTTTCTCTTCGGGGGCGTTCTT ATGATCCTGCTGGGGCTCCTGGGCAGCCTCTTCTTCCTGGGGCAGGCCCTCACAGCCATG CTGGTGTACGTGTGGAGCCGTCGAAGCCCCCGGGTGAGGGTCAACTTCTTTGGCCTCCTC ACCTTCCAGGCACCATTCCTGCCCTGGGCGCTCATGGGCTTCTCACTGCTGCTGGGCAAC TCGATCCTTGTGGACCTGCTGGGGATCGCCGTGGGCCACATCTACTACTTCCTGGAGGAT GTCTTCCCCAACCAGCCTGGAGGCAAGAGGCTGCTGCTGACCCCCAGCTTCCTGTGAGTG CTGGGGTGACAGCCCTCCTCCTGCTTCCCTCCTACGGCTCAGAGCCCAGGTGCTGCTGAC TGCAGCTCAATGTGGGCCCTTCCCCACAGGAAGCTGCTCCTGGATGCCCCAGAGGAGGAC CCCAATTACCTGCCTCTCCCGGAGGAACAGCCAGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGCCGAATTCCTTCAGGTGCCGGCGGTGACGCGGACCTACACCACGGCGTGCGTCCTC ACCACGGCCGCGGTGCTGGAGTTCCTCATCCCCTTCCAGCTCTACTTCAACCCGCACCTC GTGTTCCGGAAGTTCCAGGTCTGGAGGCTCGTCACCAACTTCCTCTTTTTCGGGCCCATG GGATTCATCTTCTTCTTCAACATGCTCTTCGTGTTCCGCTACTGCCGAATGCTCGAGGAG GGCTCCTTCCGCGGCCGCACAGCAGACTTTGTCTTCATGTTTCTCTTCGGGGGCGTTCTT ATGATCCTGCTGGGGCTCCTGGGCAGCCTCTTCTTCCTGGGGCAGGCCCTCACAGCCATG CTGGTGTACGTGTGGAGCCGTCGAAGCCCCCGGGTGAGGGTCAACTTCTTTGGCCTCCTC ACCTTCCAGGCACCATTCCTGCCCTGGGCGCTCATGGGCTTCTCACTGCTGCTGGGCAAC TCGATCCTTGTGGACCTGCTGGGGATCGCCGTGGGCCACATCTACTACTTCCTGGAGGAT GTCTTCCCCAACCAGCCTGGAGGCAAGAGGCTGCTGCTGACCCCCAGCTTCCTGTGAGTG CTGGGGTGACAGCCCTCCTCCTGCTTCCCTCCTACGGCTCAGAGCCCAGGTGCTGCTGAC TGCAGCTCAATGTGGGCCCTTCCCCACAGGAAGCTGCTCCTGGATGCCCCAGAGGAGGAC CCCAATTACCTGCCTCTCCCGGAGGAACAGCCAGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 136-243, gnl|bosTau2|chr17 (41488348-41488238) | |
| 136-243, gnl|Hg17|chr22 (22505381-22505267) | |
| 136-243, gnl|Mm7|chr10 (75549418-75549531) | |
| 307-503, gnl|bosTau2|chr17 (41487656-41487460) | |
| 307-503, gnl|canFam2|chr26 (31754376-31754139) | |
| 307-503, gnl|danRer3|chr8 (23809278-23809030) | |
| 307-503, gnl|dasNov1|scaffold_138713 (4250-4038) | |
| 307-503, gnl|echTel1|scaffold_190519 (2873-2668) | |
| 307-503, gnl|fr1|chrUn (278151108-278151331) | |
| 307-503, gnl|galGal2|chr15 (7958456-7958668) | |
| 307-503, gnl|hg17|chr22 (22504362-22504600) | |
| 307-503, gnl|Hg17|chr22 (22504595-22504399) | |
| 307-503, gnl|loxAfr1|scaffold_66599 (2603-2390) | |
| 307-503, gnl|mm7|chr10 (75550319-75550080) | |
| 307-503, gnl|Mm7|chr10 (75550083-75550279) | |
| 307-503, gnl|monDom2|scaffold_259 (60453-60658) | |
| 307-503, gnl|oryCun1|scaffold_188860 (76184-76406) | |
| 307-503, gnl|panTro1|chr23 (22534010-22534248) | |
| 307-503, gnl|rheMac2|chr16 (5223460-5223668) | |
| 307-503, gnl|rn3|chr20 (13164821-13165060) | |
| 307-503, gnl|tetNig1|chrUn_random (110562157-110561956) | |
| 307-503, gnl|xenTro1|scaffold_21 (1791972-1792176) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 136-243, gnl|bosTau2|chr17 (41488348-41488238) | |
| 136-243, gnl|Hg17|chr22 (22505381-22505267) | |
| 136-243, gnl|Mm7|chr10 (75549418-75549531) | |
| 307-503, gnl|bosTau2|chr17 (41487656-41487460) | |
| 307-503, gnl|canFam2|chr26 (31754376-31754139) | |
| 307-503, gnl|danRer3|chr8 (23809278-23809030) | |
| 307-503, gnl|dasNov1|scaffold_138713 (4250-4038) | |
| 307-503, gnl|echTel1|scaffold_190519 (2873-2668) | |
| 307-503, gnl|fr1|chrUn (278151108-278151331) | |
| 307-503, gnl|galGal2|chr15 (7958456-7958668) | |
| 307-503, gnl|hg17|chr22 (22504362-22504600) | |
| 307-503, gnl|Hg17|chr22 (22504595-22504399) | |
| 307-503, gnl|loxAfr1|scaffold_66599 (2603-2390) | |
| 307-503, gnl|mm7|chr10 (75550319-75550080) | |
| 307-503, gnl|Mm7|chr10 (75550083-75550279) | |
| 307-503, gnl|monDom2|scaffold_259 (60453-60658) | |
| 307-503, gnl|oryCun1|scaffold_188860 (76184-76406) | |
| 307-503, gnl|panTro1|chr23 (22534010-22534248) | |
| 307-503, gnl|rheMac2|chr16 (5223460-5223668) | |
| 307-503, gnl|rn3|chr20 (13164821-13165060) | |
| 307-503, gnl|tetNig1|chrUn_random (110562157-110561956) | |
| 307-503, gnl|xenTro1|scaffold_21 (1791972-1792176) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| csp (0.161186) | |
| cly (0.120642) |