Non-Coding RNA Search

Ss1.1-Pig3-SRG8017E15.3

Sequence:


               
               AACCCACTGAGCGAAGCCAGTGATCGAACCTCATGGTTATGTTTTCTCTGCGCCATGATG
GGAATTCCTGTTTTGTTTGTTTGTCTTTTTAGGGGCTGCACCTGGGGTGTAAGGAAGTTC
CTAGGCTAGGGATTGAATTGGATCTGCAGCTGCTGGCCTACACCACAGCAACAACAGGTC
TGAGCTGCGTCTGTGACCTACACCACAGCTCATGGCAACGCTGGATCCTTAACCCACTGA
GCAGAGCCAGGGATTGAACCCACATCCTCATGGATACTAGCCGGATTTGTTAACGATGAG
CCACAACAGGAACTCTTTAATGCATTAACTGCTATCATGAGAAGAAATGGATTCATAGAT
AAAAGAGCAAATCATTCCCTAGGAGTAACTCATTTCACCTGGTTGTTACAGGATGCGAAG
GCATTAACAATCAATGCAGAGGCATATAAGGTGAAGCGCCACGACGGGAACTCCAAGAAG
TAGATTACTTTTGTTCTGTGTGATCTTACCTGCATTTTTCAGATATGCATTGACCATCCT
TTAATAATCAATCTCACTCACATTTTTCACTTTGCAAAAACACCTTCATGCTTGCCCTTT
CAGTTGGTGTTCACAGTTCTTTTTGAAGAGCGAGCCACAGTTTTATCTTGAACTCTAGAA
GTGAAGTGACTTGCTCAGAGTCGTCCAGTAACTTGTTGGCAAAATCATGACGAAGGAGTT
CCTCAGTGGCCT------------------------------------------------
------------------------------------TGGGCTCAGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACCCACTGAGCGAAGCCAGTGATCGAACCTCATGGTTATGTTTTCTCTGCGCCATGATG
GGAATTCCTGTTTTGTTTGTTTGTCTTTTTAGGGGCTGCACCTGGGGTGTAAGGAAGTTC
CTAGGCTAGGGATTGAATTGGATCTGCAGCTGCTGGCCTACACCACAGCAACAACAGGTC
TGAGCTGCGTCTGTGACCTACACCACAGCTCATGGCAACGCTGGATCCTTAACCCACTGA
GCAGAGCCAGGGATTGAACCCACATCCTCATGGATACTAGCCGGATTTGTTAACGATGAG
CCACAACAGGAACTCTTTAATGCATTAACTGCTATCATGAGAAGAAATGGATTCATAGAT
AAAAGAGCAAATCATTCCCTAGGAGTAACTCATTTCACCTGGTTGTTACAGGATGCGAAG
GCATTAACAATCAATGCAGAGGCATATAAGGTGAAGCGCCACGACGGGAACTCCAAGAAG
TAGATTACTTTTGTTCTGTGTGATCTTACCTGCATTTTTCAGATATGCATTGACCATCCT
TTAATAATCAATCTCACTCACATTTTTCACTTTGCAAAAACACCTTCATGCTTGCCCTTT
CAGTTGGTGTTCACAGTTCTTTTTGAAGAGCGAGCCACAGTTTTATCTTGAACTCTAGAA
GTGAAGTGACTTGCTCAGAGTCGTCCAGTAACTTGTTGGCAAAATCATGACGAAGGAGTT
CCTCAGTGGCCT------------------------------------------------
------------------------------------TGGGCTCAGCCC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               561-707, gnl|bosTau2|chr18 (15226280-15226423)
               

               
               561-707, gnl|Hg17|chr16 (66145927-66145785)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               561-707, gnl|bosTau2|chr18 (15226280-15226423)
               

               
               561-707, gnl|Hg17|chr16 (66145927-66145785)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	561-707, gnl\|bosTau2\|chr18 (15226280-15226423)
	561-707, gnl\|Hg17\|chr16 (66145927-66145785)