Non-Coding RNA Search

Ss1.1-Pig3-SRG8018A21.5

Sequence:


               
               CCACCTGACCTGGTCGTGATCCGAGATGAAGTAGCTCTTCTGCACAGATACCAATCACAA
ATGCTGGGCTGGATTTTGATCGCCTTGGCAACCATCACGGTCCTCATCTCCTGCTCTTTG
GCGAGGTGCTGCTCTCCGCTCACGGCTCTGCAGCATCGCTACTGGACCAACCACCTCCAC
AATGAGCAGGAGCTCTTTGAACAAGCAGCTGCCCAGCACTCGAGGCTCCTCATCATGCAG
CGTATAAAGAAGCTATTTGGCTTCATTCCCGGAAATGAAGATGTCACACGCATCCGTATT
CCCTCGTGCCAGGACTGGAGAGACATTTCAGTACCCAGTTTTCTCTGTGTGGGTGATGAC
TTGCAAGGTCACTATAGCTTCCTTGGAAACAGGGTAGATGAGGAGAATGAGGAAAGCAGG
TCAGGGGGTATTGAATTAAAACCTTAATCATAGCGCCTTTCGCAATTCGGGTTGCTTAGC
TCATGCTTTCTTTTTATGGTGATGGCGTTTCAGTGTAATCGCCTTATCATTCTTACTCGC
CTCTGATATTTGTTTACATAAGTCCTTCTTAAATGCTCTTTGCAAAATCAATTTATCTGA
TAATTGTGCCACTCTCCTTTTGAAATTTCACTGATGATCTGATAATATCTATATCATTCT
GGTTAAAAAGTATAAACGAAGGTAATAGAACATTTAAATCTTAGTGGCTGTTACTTAGCT
ATGCAAAAATTAATCTCTTTTGTTATCTGCACACAGTAGCTACCTCAGAGCTGTTGTGAG
TATATATGTGATCATTAAATGTGATAATGTAAGCTAAGTACTAAGCACAGTGCCTTTCAT
AAAATAAGGGCTAATAAATGTTACTTTCACTCCTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACCTGACCTGGTCGTGATCCGAGATGAAGTAGCTCTTCTGCACAGATACCAATCACAA
ATGCTGGGCTGGATTTTGATCGCCTTGGCAACCATCACGGTCCTCATCTCCTGCTCTTTG
GCGAGGTGCTGCTCTCCGCTCACGGCTCTGCAGCATCGCTACTGGACCAACCACCTCCAC
AATGAGCAGGAGCTCTTTGAACAAGCAGCTGCCCAGCACTCGAGGCTCCTCATCATGCAG
CGTATAAAGAAGCTATTTGGCTTCATTCCCGGAAATGAAGATGTCACACGCATCCGTATT
CCCTCGTGCCAGGACTGGAGAGACATTTCAGTACCCAGTTTTCTCTGTGTGGGTGATGAC
TTGCAAGGTCACTATAGCTTCCTTGGAAACAGGGTAGATGAGGAGAATGAGGAAAGCAGG
TCAGGGGGTATTGAATTAAAACCTTAATCATAGCGCCTTTCGCAATTCGGGTTGCTTAGC
TCATGCTTTCTTTTTATGGTGATGGCGTTTCAGTGTAATCGCCTTATCATTCTTACTCGC
CTCTGATATTTGTTTACATAAGTCCTTCTTAAATGCTCTTTGCAAAATCAATTTATCTGA
TAATTGTGCCACTCTCCTTTTGAAATTTCACTGATGATCTGATAATATCTATATCATTCT
GGTTAAAAAGTATAAACGAAGGTAATAGAACATTTAAATCTTAGTGGCTGTTACTTAGCT
ATGCAAAAATTAATCTCTTTTGTTATCTGCACACAGTAGCTACCTCAGAGCTGTTGTGAG
TATATATGTGATCATTAAATGTGATAATGTAAGCTAAGTACTAAGCACAGTGCCTTTCAT
AAAATAAGGGCTAATAAATGTTACTTTCACTCCTAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34785508|gb|AAH57769.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34785508|gb|AAH57769.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               61-867, gnl|bosTau2|chr9 (16773096-16773919)
               

               
               61-867, gnl|Hg17|chr6 (116985681-116986482)
               

               
               61-867, gnl|Mm7|chr10 (33822536-33821731)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               61-867, gnl|bosTau2|chr9 (16773096-16773919)
               

               
               61-867, gnl|Hg17|chr6 (116985681-116986482)
               

               
               61-867, gnl|Mm7|chr10 (33822536-33821731)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ski (0.146735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.146735)

	61-867, gnl\|bosTau2\|chr9 (16773096-16773919)
	61-867, gnl\|Hg17\|chr6 (116985681-116986482)
	61-867, gnl\|Mm7\|chr10 (33822536-33821731)