Non-Coding RNA Search

Ss1.1-Pig3-SRG8018B22.3

Sequence:


               
               GGGGTCATATGGTAGTTTTATTTTTAGTTTTTTGAGAAACCTCCATACTGTTTTCCACAG
TGGCTGCACCAATTTACATTCCCACCAACAGTGTACAAAGGTTCCCCAGGTAGGTAGGTC
TTTAGAGGCAGAGTATGTTAACCCAAATATTCTGGCCCATAGGAAAAGGCTAAGTTTTAT
CGTAAACTAATAAACTGGAATTCTAGGTTGTACATGAGCAGCAGTGAGCTTGGTTAATAA
TTAGCGAACTGCCAAGAGACAAAGCTACTCTCTGTGCTGGCAAAATCTGATTTCTGGGTA
TTTACCTGGATGCTATGGGAGCGCAAATATAGAGTATGGCCACAAATACGTATTGTGTGC
TAATTATCATTTCTAAAAGTAAAAGCATCACTTTAATTTGTAAAGGAATTCAGAAAGCTG
ACTTTCAAAATAAAATGCATATGTTTAGATACTTTTTATTTGTAGCTTGGGTTTAAATTT
TAATAGGTGTAACTAATTTTTGCTCTAATTTGTTCATTCTGGAATAATCCTAAATATACG
AATTGTTTGCATGTTCCTTGACGAGAATCTTTTTTGAAAAGCTTTTTGAATCATTAATGG
TTTTTCATATTTTAATAAAGTATTTGAAAGTTTTATAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGTCATATGGTAGTTTTATTTTTAGTTTTTTGAGAAACCTCCATACTGTTTTCCACAG
TGGCTGCACCAATTTACATTCCCACCAACAGTGTACAAAGGTTCCCCAGGTAGGTAGGTC
TTTAGAGGCAGAGTATGTTAACCCAAATATTCTGGCCCATAGGAAAAGGCTAAGTTTTAT
CGTAAACTAATAAACTGGAATTCTAGGTTGTACATGAGCAGCAGTGAGCTTGGTTAATAA
TTAGCGAACTGCCAAGAGACAAAGCTACTCTCTGTGCTGGCAAAATCTGATTTCTGGGTA
TTTACCTGGATGCTATGGGAGCGCAAATATAGAGTATGGCCACAAATACGTATTGTGTGC
TAATTATCATTTCTAAAAGTAAAAGCATCACTTTAATTTGTAAAGGAATTCAGAAAGCTG
ACTTTCAAAATAAAATGCATATGTTTAGATACTTTTTATTTGTAGCTTGGGTTTAAATTT
TAATAGGTGTAACTAATTTTTGCTCTAATTTGTTCATTCTGGAATAATCCTAAATATACG
AATTGTTTGCATGTTCCTTGACGAGAATCTTTTTTGAAAAGCTTTTTGAATCATTAATGG
TTTTTCATATTTTAATAAAGTATTTGAAAGTTTTATAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               2-104, gnl|bosTau2|chr22 (42933917-42934019)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-104, gnl|bosTau2|chr22 (42933917-42934019)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               thg (1.3947)
               

               
               fty (0.351679)
               

               
               col (0.195008)
               

               
               jej (0.0989218)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (1.3947)
               

               
               fty (0.351679)
               

               
               col (0.195008)
               

               
               jej (0.0989218)