Non-Coding RNA Search

Ss1.1-Pig3-SRG8018F14.3

Sequence:


               
               TCTAAAAATCATTGAAGTATTCATTGATTAGCGTTTTGTCAATAGGAAGTAGTTTCCCAC
TATGTAACCACGTATCTGGTTCATTTCACACTTCAAGCTAAAAATCCTTATGTATTTGCT
TAGAAGTTTATTTGAAATCTTATAGTCTAACAACTTCTGTAATATTACATCTGTTTGAAG
TTTTGCATCATCTTAATTCCCTTGGTTTGCATTTCAGTTGTATAAAGTGTTTCTAAAAAT
GGTTATAGTTATAACTGAGTTATTAACTAACTTCTTAATTTTGATTTTTATGGATGTGAA
AAATGCTGCTAATTGTCTATGTTATGTGTAGTATATTACAATTTAATTAAGTACAGTACT
TTAAAGAAAGAAGCCTTTCTTTTGCTTAGAACTTAATTGTAGGTTTTTCTGAAGTTATTT
CATGTAGATATGTGTTTTAAACAAGTCTGAAAGTGTTACATACTTTTAGGTTATAGGGGC
TGGTGAGAAGACAGCTGAGGACAGGAAAAACATGTAAAAGACTCCATGGAGTTCAAAGTT
TTACCCTGAGTTCCATATTCCATATATGTTTTTGCTTAAGGCATTTTCTCATGTGACATT
AGAAGAGCTATATCCAAAGGAAAATTTTTTGTGGCAAAGATTTATTTTACATTTTAACTT
TTGGGGTTTTGTTTATTTGTTTTTGCAGAATAAAGAGCACTGAACTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTAAAAATCATTGAAGTATTCATTGATTAGCGTTTTGTCAATAGGAAGTAGTTTCCCAC
TATGTAACCACGTATCTGGTTCATTTCACACTTCAAGCTAAAAATCCTTATGTATTTGCT
TAGAAGTTTATTTGAAATCTTATAGTCTAACAACTTCTGTAATATTACATCTGTTTGAAG
TTTTGCATCATCTTAATTCCCTTGGTTTGCATTTCAGTTGTATAAAGTGTTTCTAAAAAT
GGTTATAGTTATAACTGAGTTATTAACTAACTTCTTAATTTTGATTTTTATGGATGTGAA
AAATGCTGCTAATTGTCTATGTTATGTGTAGTATATTACAATTTAATTAAGTACAGTACT
TTAAAGAAAGAAGCCTTTCTTTTGCTTAGAACTTAATTGTAGGTTTTTCTGAAGTTATTT
CATGTAGATATGTGTTTTAAACAAGTCTGAAAGTGTTACATACTTTTAGGTTATAGGGGC
TGGTGAGAAGACAGCTGAGGACAGGAAAAACATGTAAAAGACTCCATGGAGTTCAAAGTT
TTACCCTGAGTTCCATATTCCATATATGTTTTTGCTTAAGGCATTTTCTCATGTGACATT
AGAAGAGCTATATCCAAAGGAAAATTTTTTGTGGCAAAGATTTATTTTACATTTTAACTT
TTGGGGTTTTGTTTATTTGTTTTTGCAGAATAAAGAGCACTGAACTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-708, gnl|bosTau2|chr9 (48844112-48843403)
               

               
               5-708, gnl|Hg17|chr6 (147750243-147750954)
               

               
               5-708, gnl|Mm7|chr10 (9458122-9457449)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-708, gnl|bosTau2|chr9 (48844112-48843403)
               

               
               5-708, gnl|Hg17|chr6 (147750243-147750954)
               

               
               5-708, gnl|Mm7|chr10 (9458122-9457449)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               gul (0.177588)
               

               
               lin (0.145603)
               

               
               cbl (0.114797)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               lin (0.145603)
               

               
               cbl (0.114797)

	5-708, gnl\|bosTau2\|chr9 (48844112-48843403)
	5-708, gnl\|Hg17\|chr6 (147750243-147750954)
	5-708, gnl\|Mm7\|chr10 (9458122-9457449)