Non-Coding RNA Search

Ss1.1-Pig3-SRG8018I05.5

Sequence:


               
               TTTTTTTTTTTTTTTTAAAGCAACAGCGCCCTACGAGGACACCAGGTTTCTAAATGATTC
ATCTTCTCACAGACCTTGATATTCAATCCAGGTGTAGGAATAACAGGATAGCCCTTGGGT
TCTATCCTCAGGGCTTGGAAAGGCTTCAGTGAAATTCTATAGCAAAAGGCCCCTGTGCTT
ACCCTGACTTTCTCTTTGTTCTACTCACTTTTTATCTCTGAAAAGCAAAGGGATTTCCTT
GGGGGATTAAGCAGAGGAAACAGCCAAAGGTAGCTATCGTGTTTCATTCGAATTAGGAGA
TGCCAAAGAATCCTGAAGTCAACTCAACGGGAAGCCCTTTGCCCCAGTCTTGGAAGGGTC
CCCGGGTCTCACCAGCACGAGCGTCACAAGTCCTCATCCCACCCAGACGTATCATCCTCT
CTTCTCCCTCACCCGACCCCCACTCCGGGAATATCTTGGACAAACAGTGTGGTTTCTCGA
GCAAGGCAGAGAAATGTCTCATCGGAATGTGGTACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTAAAGCAACAGCGCCCTACGAGGACACCAGGTTTCTAAATGATTC
ATCTTCTCACAGACCTTGATATTCAATCCAGGTGTAGGAATAACAGGATAGCCCTTGGGT
TCTATCCTCAGGGCTTGGAAAGGCTTCAGTGAAATTCTATAGCAAAAGGCCCCTGTGCTT
ACCCTGACTTTCTCTTTGTTCTACTCACTTTTTATCTCTGAAAAGCAAAGGGATTTCCTT
GGGGGATTAAGCAGAGGAAACAGCCAAAGGTAGCTATCGTGTTTCATTCGAATTAGGAGA
TGCCAAAGAATCCTGAAGTCAACTCAACGGGAAGCCCTTTGCCCCAGTCTTGGAAGGGTC
CCCGGGTCTCACCAGCACGAGCGTCACAAGTCCTCATCCCACCCAGACGTATCATCCTCT
CTTCTCCCTCACCCGACCCCCACTCCGGGAATATCTTGGACAAACAGTGTGGTTTCTCGA
GCAAGGCAGAGAAATGTCTCATCGGAATGTGGTACA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               17-433, gnl|bosTau2|chr5 (12706330-12705915)
               

               
               17-433, gnl|Hg17|chr12 (88308095-88308502)
               

               
               17-433, gnl|Mm7|chr10 (98765937-98765506)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-433, gnl|bosTau2|chr5 (12706330-12705915)
               

               
               17-433, gnl|Hg17|chr12 (88308095-88308502)
               

               
               17-433, gnl|Mm7|chr10 (98765937-98765506)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cly (0.120642)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)
               

               
               ebs (0.118301)

	17-433, gnl\|bosTau2\|chr5 (12706330-12705915)
	17-433, gnl\|Hg17\|chr12 (88308095-88308502)
	17-433, gnl\|Mm7\|chr10 (98765937-98765506)