Non-Coding RNA Search

Ss1.1-Pig3-SRG8018K02.5

Sequence:


               
               GTTCTCTTTGGGGGTACCAGGTTAGGAGGAGAGGAGGGAGGGCTCCAGGAAGGGCCTAAG
CCTATGACTAACATTTGAGCAAGAGGGTCTTGTGGGTGGTCTCTGCTTCTTCCTTCATTT
CTCTTTTGATTCCTACAGTCCGTCTCCTGAGGAAGGCCTGGGAGATGAATTTGACCTTAT
AGATCATTCTGACTTACACATTTTGGACTTTAGCCCTAGTCTGAAGACTCTGTGCAAACT
GGCTGTGATTCAGTATAACCTGGACCAGTCCTGTTTGCCCCATGACATCAGGTACAGTGA
ATGGTTGGAAAGGAGGGATTGGTTGAGGGTGATGGGCAGCACAGGCATGACCCGATTGGC
TTGGTCTTGGTGTAAAGGAGAGAGAGATTGTTCTGCTGGGGATGTAATATACTTGTGGAG
AGTGAATTGGAAGGAAAAATAAGACTGTCAGCTGGGGTAAATTACATGGGGGGAAAAATT
CAGTTTCAAACAAACCAAGCTCATAAGCATCACTTCTCTTGAGACCTGAGCTTATGCAGT
TGTTTTTGTTAACATGCTGAGAAGGTTTGAGTAAATTCTTAGAATCTAGCTGCAGAGAGA
CGTTTAGGAGCTTCTGGATCACATTAGTTCCAGAGTTAAGGGAAGTCCTTCCTACTTCCC
TTTGAGTCCGTATTCTTAGGTCCAAATCAACTGTTGAAAGTTATCTGGTGTACGATTGTG
CCCTTTGGGGTCATTCTGCGACACTTCACTCTTTTTGTAACAGTTCTGCTTAACTCTTAC
TTGCTGAGGGTCTGTGTGTTCAGCATGTGGTGACAGAGTATATACAAGGCTGAACTGAGG
GATCCAGGCTGGCCCAAGTGCTTAATACCAAGTAGACTGTAGCCTTGGCATAAGGAGGTA
CTTAGTGAATCTTTGTTGAATGACAGTATTGCCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCTCTTTGGGGGTACCAGGTTAGGAGGAGAGGAGGGAGGGCTCCAGGAAGGGCCTAAG
CCTATGACTAACATTTGAGCAAGAGGGTCTTGTGGGTGGTCTCTGCTTCTTCCTTCATTT
CTCTTTTGATTCCTACAGTCCGTCTCCTGAGGAAGGCCTGGGAGATGAATTTGACCTTAT
AGATCATTCTGACTTACACATTTTGGACTTTAGCCCTAGTCTGAAGACTCTGTGCAAACT
GGCTGTGATTCAGTATAACCTGGACCAGTCCTGTTTGCCCCATGACATCAGGTACAGTGA
ATGGTTGGAAAGGAGGGATTGGTTGAGGGTGATGGGCAGCACAGGCATGACCCGATTGGC
TTGGTCTTGGTGTAAAGGAGAGAGAGATTGTTCTGCTGGGGATGTAATATACTTGTGGAG
AGTGAATTGGAAGGAAAAATAAGACTGTCAGCTGGGGTAAATTACATGGGGGGAAAAATT
CAGTTTCAAACAAACCAAGCTCATAAGCATCACTTCTCTTGAGACCTGAGCTTATGCAGT
TGTTTTTGTTAACATGCTGAGAAGGTTTGAGTAAATTCTTAGAATCTAGCTGCAGAGAGA
CGTTTAGGAGCTTCTGGATCACATTAGTTCCAGAGTTAAGGGAAGTCCTTCCTACTTCCC
TTTGAGTCCGTATTCTTAGGTCCAAATCAACTGTTGAAAGTTATCTGGTGTACGATTGTG
CCCTTTGGGGTCATTCTGCGACACTTCACTCTTTTTGTAACAGTTCTGCTTAACTCTTAC
TTGCTGAGGGTCTGTGTGTTCAGCATGTGGTGACAGAGTATATACAAGGCTGAACTGAGG
GATCCAGGCTGGCCCAAGTGCTTAATACCAAGTAGACTGTAGCCTTGGCATAAGGAGGTA
CTTAGTGAATCTTTGTTGAATGACAGTATTGCCAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               213-654, gnl|bosTau2|chr23 (13070198-13070633)
               

               
               213-654, gnl|Hg17|chr6 (43095004-43095437)
               

               
               213-654, gnl|Mm7|chr17 (44805243-44804816)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               213-654, gnl|bosTau2|chr23 (13070198-13070633)
               

               
               213-654, gnl|Hg17|chr6 (43095004-43095437)
               

               
               213-654, gnl|Mm7|chr17 (44805243-44804816)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	213-654, gnl\|bosTau2\|chr23 (13070198-13070633)
	213-654, gnl\|Hg17\|chr6 (43095004-43095437)
	213-654, gnl\|Mm7\|chr17 (44805243-44804816)