Non-Coding RNA Search

Ss1.1-Pig3-SRG8018K24.3

Sequence:


               
               AAGGATTTGATTACTTACTGAAAGCAGCGGAAGCTGGCGACAGACAGTCCATGATTCTGG
TGGCCCGAGCTTTTGACACCGGCCAGAACCTCAGCCCAGACAGGTCCCCAAACTGGCCAG
AGGCTCTGCGCTGGTACAACACTGCCCTGGAGACAACAGACTGTGATGAGGGCGGCGAGT
ATGATGGGATGCAAGATGAGCCCCGGTACACGCTACTGGCCAGGGAGGCGGAGATGCTGT
TCACAGGCGGCTACGGGCTGGACAAGGACCCACAGAGATCAGGTGACTTGTATACTCAAG
CAGCGGAGGCAGCAATGGAAGCCATGAAAGGCCGGCTGGCCAACCAGTACTATGAGAAGG
CTGAGGAGGCCTGGGCCCAGATGGAGGAATAACGCTGGGAAAATCACTGCCAGCCAGTCC
CAAGCAGAGGGATAGGAGGGGGGAAAAAGACCTCTTTGCTCGTTTGGAGGTAGGGGGTGG
GGGTGGAAGGGGCACATATTTTTAGCACCTTGTAAATCAACTTTTGTATTTTATTTTTTG
ACTCTTGAAAATATCTTTACTACCAGCGGAGACACTGCAGCTGTCCCCTAGGGCCGCATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGGATTTGATTACTTACTGAAAGCAGCGGAAGCTGGCGACAGACAGTCCATGATTCTGG
TGGCCCGAGCTTTTGACACCGGCCAGAACCTCAGCCCAGACAGGTCCCCAAACTGGCCAG
AGGCTCTGCGCTGGTACAACACTGCCCTGGAGACAACAGACTGTGATGAGGGCGGCGAGT
ATGATGGGATGCAAGATGAGCCCCGGTACACGCTACTGGCCAGGGAGGCGGAGATGCTGT
TCACAGGCGGCTACGGGCTGGACAAGGACCCACAGAGATCAGGTGACTTGTATACTCAAG
CAGCGGAGGCAGCAATGGAAGCCATGAAAGGCCGGCTGGCCAACCAGTACTATGAGAAGG
CTGAGGAGGCCTGGGCCCAGATGGAGGAATAACGCTGGGAAAATCACTGCCAGCCAGTCC
CAAGCAGAGGGATAGGAGGGGGGAAAAAGACCTCTTTGCTCGTTTGGAGGTAGGGGGTGG
GGGTGGAAGGGGCACATATTTTTAGCACCTTGTAAATCAACTTTTGTATTTTATTTTTTG
ACTCTTGAAAATATCTTTACTACCAGCGGAGACACTGCAGCTGTCCCCTAGGGCCGCATT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               102-284, gnl|bosTau2|chr25 (18774246-18774064)
               

               
               102-284, gnl|Hg17|chr16 (22199018-22199200)
               

               
               102-284, gnl|Mm7|chr7 (116821649-116821831)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               102-284, gnl|bosTau2|chr25 (18774246-18774064)
               

               
               102-284, gnl|Hg17|chr16 (22199018-22199200)
               

               
               102-284, gnl|Mm7|chr7 (116821649-116821831)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nep (0.183925)
               

               
               mga (0.160205)
               

               
               bla (0.124347)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)
               

               
               mga (0.160205)
               

               
               bla (0.124347)

	102-284, gnl\|bosTau2\|chr25 (18774246-18774064)
	102-284, gnl\|Hg17\|chr16 (22199018-22199200)
	102-284, gnl\|Mm7\|chr7 (116821649-116821831)