Non-Coding RNA Search

Ss1.1-Pig3-SRG8018L13.5

Sequence:


               
               AATATGATCCAGCAGTTCCACTTCTGGGTATATACACAAAGAAAATGAAAACACTAATTC
AAAAAGATACATGCACCCCAATGTTCAGAGCAGCATTATTTACAATAGCCAAGATATGGA
AGTGACCTAAGTGTCCATCAACAGACAAATGGATAAAGCTTATATATACACAATGGAATT
ACACATAGTAAAATAAATCAGACAAAGAAAGAAGGTATTACGCATAGTAAAATAAATCAG
ACAGAAAAAGATAAATACTGTATGTTATTACTTACACAAGGAATCTAAAAAATAAAAAAG
CAAAAGAATATAACAAAATAGAAATCCGAATGGCCATTTATAATTATAAAAAGATGCCAA
TTTTTTTTTATTATTTAAGGAAATTCAGATGAGAAATATATAGAGATAATATTTCATACC
CGCTAAATTTGCAAACATTTTCTTATTTTGTCAAATCTTGAGTGTGGAGCAATGAATATT
CTCACACACAGTTGTTAAAAATGTAAATGAGTACAAATACTCTGGAAAGTAAAACAGTGT
TATCCAGTATATTCACTATATGAACTCCAGTAGTCAGGGATAAAGTTCATAGCAGTAACA
TTTTAACAAAATAAAACTGAAACAACTCCAATGGCCTTCAATGGATAAACTATGGTTACA
TGTGGAATACATTACATTTCAACAGGAAAAAAAATTCAAGGAACAATAGCTACTAAAATC
AACATGGGATAAATCTCAGGAATATAATTTTAAGTTTAAAAAGTCAGGATTATATGCACA
ATATTATATCCATGCATAAAAAAATTAGAAAATATGCTAATAAACATTTTGTTTAGGGCT
ATATGGCACAACTATAAATCAAAGTCAAGAAATAATAAGGAAATTTGTAGGAAAATGGTT
ACCCTAATGAGGGATGAGGATGAGCCAAGGGTAGGGAGTGGCATATGATTAGGCAGGGGT
CCCCAGGGGGCCTAAAATGGCATTTTTCTCTTTCCTCAGTTAAGAAGTAGGTACACATGT
TTTTATTATATTATTACTTAAACTACATATATGGCTAATATATGTTTATATGTGTGATTT
ATTTAATAATAATAAACAAAATTCAGCCATATATTCTTTGAAACTATAACTCCACATCAA
AATTTTTTCTTAGAAAACTGAGCAAGAATATAAAAGATTGGGGAGCGGCAGTGAGGGGGT
GAGTTGGGGAGTGGTGCTGACAGAGATATTTACAATTCTGATTTTCTTCTGAACTTTAGT
CCTGCACTTTACCTTAATGCTCCTTATGTCTATCTGAAAATCATTCCTACACCACAAGGC
TAAACCCTCAGATGTTTTCTAGCTTGACTTGTGTTTTTATTAAACACCATCATCTTCCCA
GTAAACCAGACTCCTTTCTCCCCTCTCTCTCTGAGCTTCCTTTATGTCAGCTTTCTTTTC
ATGTGTGACATGTATAGCTAAATTGTCTTTCTGCTACAAGCCCATCAATTTTTTGATCAT
TTATATAAATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATATGATCCAGCAGTTCCACTTCTGGGTATATACACAAAGAAAATGAAAACACTAATTC
AAAAAGATACATGCACCCCAATGTTCAGAGCAGCATTATTTACAATAGCCAAGATATGGA
AGTGACCTAAGTGTCCATCAACAGACAAATGGATAAAGCTTATATATACACAATGGAATT
ACACATAGTAAAATAAATCAGACAAAGAAAGAAGGTATTACGCATAGTAAAATAAATCAG
ACAGAAAAAGATAAATACTGTATGTTATTACTTACACAAGGAATCTAAAAAATAAAAAAG
CAAAAGAATATAACAAAATAGAAATCCGAATGGCCATTTATAATTATAAAAAGATGCCAA
TTTTTTTTTATTATTTAAGGAAATTCAGATGAGAAATATATAGAGATAATATTTCATACC
CGCTAAATTTGCAAACATTTTCTTATTTTGTCAAATCTTGAGTGTGGAGCAATGAATATT
CTCACACACAGTTGTTAAAAATGTAAATGAGTACAAATACTCTGGAAAGTAAAACAGTGT
TATCCAGTATATTCACTATATGAACTCCAGTAGTCAGGGATAAAGTTCATAGCAGTAACA
TTTTAACAAAATAAAACTGAAACAACTCCAATGGCCTTCAATGGATAAACTATGGTTACA
TGTGGAATACATTACATTTCAACAGGAAAAAAAATTCAAGGAACAATAGCTACTAAAATC
AACATGGGATAAATCTCAGGAATATAATTTTAAGTTTAAAAAGTCAGGATTATATGCACA
ATATTATATCCATGCATAAAAAAATTAGAAAATATGCTAATAAACATTTTGTTTAGGGCT
ATATGGCACAACTATAAATCAAAGTCAAGAAATAATAAGGAAATTTGTAGGAAAATGGTT
ACCCTAATGAGGGATGAGGATGAGCCAAGGGTAGGGAGTGGCATATGATTAGGCAGGGGT
CCCCAGGGGGCCTAAAATGGCATTTTTCTCTTTCCTCAGTTAAGAAGTAGGTACACATGT
TTTTATTATATTATTACTTAAACTACATATATGGCTAATATATGTTTATATGTGTGATTT
ATTTAATAATAATAAACAAAATTCAGCCATATATTCTTTGAAACTATAACTCCACATCAA
AATTTTTTCTTAGAAAACTGAGCAAGAATATAAAAGATTGGGGAGCGGCAGTGAGGGGGT
GAGTTGGGGAGTGGTGCTGACAGAGATATTTACAATTCTGATTTTCTTCTGAACTTTAGT
CCTGCACTTTACCTTAATGCTCCTTATGTCTATCTGAAAATCATTCCTACACCACAAGGC
TAAACCCTCAGATGTTTTCTAGCTTGACTTGTGTTTTTATTAAACACCATCATCTTCCCA
GTAAACCAGACTCCTTTCTCCCCTCTCTCTCTGAGCTTCCTTTATGTCAGCTTTCTTTTC
ATGTGTGACATGTATAGCTAAATTGTCTTTCTGCTACAAGCCCATCAATTTTTTGATCAT
TTATATAAATGA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               2-313, gnl|bosTau2|chr1 (53704091-53703783)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-313, gnl|bosTau2|chr1 (53704091-53703783)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)