Ss1.1-Pig3-SRG8019D14.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTATCTGGACCCCCACACCACGCAGCCGGCCGTGCAGGTTACTGACAGCTGCCTGATCCC GGACGAGAGCTTCCACTGCCAGCACCCGCCCCACAGGATGAGCATCGCAGAGCTTGACCC GTCCATCGCCGTGGGCTTTTTCTGTCAGACTGAGGAAGACTTTAACGACTGGTGCCAGCA GGTCAGAAAGCTATCCCTGCTCGGCGGTGCCCTGCCCATGTTTGAACTGGTGGAGCAGCA ACCTTCCCACCTGGCCTGCCCAGACGTCCTCAACCTGTCCTTAGATTCTTCTGATGTGGA GCGACTGGAAAGATTCTTTGACTCAGAAGATGAAGACTTTGAAATCTTGTCCCTTTGAAA ATGCGGCAGTTTGGGGACAGTCCCACTGGCCCTGCCGGGGCGCCTTCAGAGCTCAGCCCC GCCTCGGGGTGCGGCCACCACATCCCATCGGCCTGGACAGAGCCCGCGCTGCTGGAGTCT GACCGGGAGCGGGGCTGTGCACCCACGAGGGGCCACCGGCAGGAGCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTATCTGGACCCCCACACCACGCAGCCGGCCGTGCAGGTTACTGACAGCTGCCTGATCCC GGACGAGAGCTTCCACTGCCAGCACCCGCCCCACAGGATGAGCATCGCAGAGCTTGACCC GTCCATCGCCGTGGGCTTTTTCTGTCAGACTGAGGAAGACTTTAACGACTGGTGCCAGCA GGTCAGAAAGCTATCCCTGCTCGGCGGTGCCCTGCCCATGTTTGAACTGGTGGAGCAGCA ACCTTCCCACCTGGCCTGCCCAGACGTCCTCAACCTGTCCTTAGATTCTTCTGATGTGGA GCGACTGGAAAGATTCTTTGACTCAGAAGATGAAGACTTTGAAATCTTGTCCCTTTGAAA ATGCGGCAGTTTGGGGACAGTCCCACTGGCCCTGCCGGGGCGCCTTCAGAGCTCAGCCCC GCCTCGGGGTGCGGCCACCACATCCCATCGGCCTGGACAGAGCCCGCGCTGCTGGAGTCT GACCGGGAGCGGGGCTGTGCACCCACGAGGGGCCACCGGCAGGAGCTC |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 1-134, gnl|bosTau2|chr14 (8135450-8135583) | |
| 1-134, gnl|Hg17|chr2 (242327958-242328091) | |
| 1-134, gnl|Mm7|chr1 (93692575-93692708) | |
| 282-403, gnl|bosTau2|chr14 (8137238-8137358) | |
| 282-403, gnl|canFam2|chr25 (54449009-54449121) | |
| 282-403, gnl|canFam2|chr25 (54449009-54449121) | |
| 282-403, gnl|dasNov1|scaffold_121256 (1185-1075) | |
| 282-403, gnl|dasNov1|scaffold_121256 (1185-1075) | |
| 282-403, gnl|fr1|chrUn (247392824-247392731) | |
| 282-403, gnl|fr1|chrUn (247392824-247392731) | |
| 282-403, gnl|galGal2|chr9 (8821239-8821374) | |
| 282-403, gnl|galGal2|chr9 (8821239-8821374) | |
| 282-403, gnl|hg17|chr2 (242331572-242331683) | |
| 282-403, gnl|Hg17|chr2 (242331593-242331712) | |
| 282-403, gnl|hg17|chr2_random (321965-322076) | |
| 282-403, gnl|loxAfr1|scaffold_19868 (17199-17089) | |
| 282-403, gnl|loxAfr1|scaffold_19868 (17199-17089) | |
| 282-403, gnl|mm7|chr1 (93695473-93695582) | |
| 282-403, gnl|mm7|chr1 (93695473-93695582) | |
| 282-403, gnl|Mm7|chr1 (93695492-93695614) | |
| 282-403, gnl|monDom2|scaffold_162 (1510321-1510178) | |
| 282-403, gnl|monDom2|scaffold_162 (1510321-1510178) | |
| 282-403, gnl|oryCun1|scaffold_195303 (3927-4035) | |
| 282-403, gnl|oryCun1|scaffold_195303 (3927-4035) | |
| 282-403, gnl|panTro1|chr13 (133975168-133975279) | |
| 282-403, gnl|panTro1|chr13 (133975168-133975279) | |
| 282-403, gnl|rheMac2|chr12 (105591948-105592059) | |
| 282-403, gnl|rheMac2|chr12 (105591948-105592059) | |
| 282-403, gnl|rn3|chr9 (93266889-93266990) | |
| 282-403, gnl|rn3|chr9 (93266889-93266990) | |
| 282-403, gnl|tetNig1|chrUn_random (88735642-88735730) | |
| 282-403, gnl|tetNig1|chrUn_random (88735642-88735730) | |
| 282-403, gnl|xenTro1|scaffold_209 (1604553-1604455) | |
| 282-403, gnl|xenTro1|scaffold_209 (1604553-1604455) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-134, gnl|bosTau2|chr14 (8135450-8135583) | |
| 1-134, gnl|Hg17|chr2 (242327958-242328091) | |
| 1-134, gnl|Mm7|chr1 (93692575-93692708) | |
| 282-403, gnl|bosTau2|chr14 (8137238-8137358) | |
| 282-403, gnl|canFam2|chr25 (54449009-54449121) | |
| 282-403, gnl|canFam2|chr25 (54449009-54449121) | |
| 282-403, gnl|dasNov1|scaffold_121256 (1185-1075) | |
| 282-403, gnl|dasNov1|scaffold_121256 (1185-1075) | |
| 282-403, gnl|fr1|chrUn (247392824-247392731) | |
| 282-403, gnl|fr1|chrUn (247392824-247392731) | |
| 282-403, gnl|galGal2|chr9 (8821239-8821374) | |
| 282-403, gnl|galGal2|chr9 (8821239-8821374) | |
| 282-403, gnl|hg17|chr2 (242331572-242331683) | |
| 282-403, gnl|Hg17|chr2 (242331593-242331712) | |
| 282-403, gnl|hg17|chr2_random (321965-322076) | |
| 282-403, gnl|loxAfr1|scaffold_19868 (17199-17089) | |
| 282-403, gnl|loxAfr1|scaffold_19868 (17199-17089) | |
| 282-403, gnl|mm7|chr1 (93695473-93695582) | |
| 282-403, gnl|mm7|chr1 (93695473-93695582) | |
| 282-403, gnl|Mm7|chr1 (93695492-93695614) | |
| 282-403, gnl|monDom2|scaffold_162 (1510321-1510178) | |
| 282-403, gnl|monDom2|scaffold_162 (1510321-1510178) | |
| 282-403, gnl|oryCun1|scaffold_195303 (3927-4035) | |
| 282-403, gnl|oryCun1|scaffold_195303 (3927-4035) | |
| 282-403, gnl|panTro1|chr13 (133975168-133975279) | |
| 282-403, gnl|panTro1|chr13 (133975168-133975279) | |
| 282-403, gnl|rheMac2|chr12 (105591948-105592059) | |
| 282-403, gnl|rheMac2|chr12 (105591948-105592059) | |
| 282-403, gnl|rn3|chr9 (93266889-93266990) | |
| 282-403, gnl|rn3|chr9 (93266889-93266990) | |
| 282-403, gnl|tetNig1|chrUn_random (88735642-88735730) | |
| 282-403, gnl|tetNig1|chrUn_random (88735642-88735730) | |
| 282-403, gnl|xenTro1|scaffold_209 (1604553-1604455) | |
| 282-403, gnl|xenTro1|scaffold_209 (1604553-1604455) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| pla (0.133672) | |
| ese (0.126502) | |
| med (0.116252) | |
| cty (0.10408) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) | |
| ese (0.126502) | |
| med (0.116252) | |
| cty (0.10408) |