Non-Coding RNA Search

Ss1.1-Pig3-SRG8019E10.3

Sequence:


               
               GTAGTGAATAAAATGATTTTGGCCTTTGTGTTATATTCTTCATCTTTAGAAACACCCCAA
CAACTAGGGGGTAATTTAAGGGAACTATTTTTGTTAAAAGGCTTTTCAATAAGATAATAT
TTTCTGGTAGACATACTATAAAATTTAATTTCAATTTGGAAACTTAGGGTATTGAGCTGT
TTGATATTTATTTTGTTTTTTCCAGCTGGGTATCTTGAGCATTAGATGTTTTTTAATATA
TGTGCATTTATGTATATTCTAAGATGTGAAGTCAGGCATTATCTTCTCTTTATAAATTTA
ATTTATTTTGTGTTATTTTTTTAAGGAGTCATTTATTTCAATCATGAAAACACCTGGAAG
CTGCAGGAAACTCATCTCATTTTGTTGTAGTACTGATTGCTATCAATGGTTTGCTATTTT
TTACCTGAGTATCCTGTTTATTTGTAAAGAAACTAAATGACAGTCTAGCTCATTTTTAAA
TTTTGTATTAGAAGCAGAGTTTACAGTTAGTACTATCTTAGAATTCAAAGATGTTTGCTT
CCCGGGTGTTCATCTTAGTTTGACATTATTAAAGTTTCATAATGAACTTAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAGTGAATAAAATGATTTTGGCCTTTGTGTTATATTCTTCATCTTTAGAAACACCCCAA
CAACTAGGGGGTAATTTAAGGGAACTATTTTTGTTAAAAGGCTTTTCAATAAGATAATAT
TTTCTGGTAGACATACTATAAAATTTAATTTCAATTTGGAAACTTAGGGTATTGAGCTGT
TTGATATTTATTTTGTTTTTTCCAGCTGGGTATCTTGAGCATTAGATGTTTTTTAATATA
TGTGCATTTATGTATATTCTAAGATGTGAAGTCAGGCATTATCTTCTCTTTATAAATTTA
ATTTATTTTGTGTTATTTTTTTAAGGAGTCATTTATTTCAATCATGAAAACACCTGGAAG
CTGCAGGAAACTCATCTCATTTTGTTGTAGTACTGATTGCTATCAATGGTTTGCTATTTT
TTACCTGAGTATCCTGTTTATTTGTAAAGAAACTAAATGACAGTCTAGCTCATTTTTAAA
TTTTGTATTAGAAGCAGAGTTTACAGTTAGTACTATCTTAGAATTCAAAGATGTTTGCTT
CCCGGGTGTTCATCTTAGTTTGACATTATTAAAGTTTCATAATGAACTTAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-565, gnl|bosTau2|chr26 (1603010-1603601)
               

               
               1-565, gnl|Hg17|chr10 (57779223-57778676)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-565, gnl|bosTau2|chr26 (1603010-1603601)
               

               
               1-565, gnl|Hg17|chr10 (57779223-57778676)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               ski (0.146735)
               

               
               lnt (0.142308)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.146735)
               

               
               lnt (0.142308)

	1-565, gnl\|bosTau2\|chr26 (1603010-1603601)
	1-565, gnl\|Hg17\|chr10 (57779223-57778676)