Ss1.1-Pig3-SRG8019G09.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTATTGAACGTGAGACCGTTAATGATTTCCGAGAGAAAATGATGTATAAAGCTATAGACC GTGTTCAAAATATGAAACCAGAAGAGTATGCTCATAAGATTTTGGAATTACAGATGCAAA GTATAATGGAAAAGAAAATGAAAATCAAGAGAAGTATTGCAAAGCAATGCAAGGACAACC CATCATTAATAAGTTTTCTATGCAAAAACTGCAGTGTGCTAGCCTGCTCTGGAGAAGATA TCCACATAATTGAGAAGATGCACCATGTCAACATGACACCAGAGTTCAAGAACCTGTATA TTGTGAGAGGAAACAAGGCACTGCAGACGAAGTTTGCTGACTATCAAACAAATGGCGAGA TAATCTGCAAAAAATGTGGCCAAGCTTGGGGAACGATGATGGTGCACAAAGGCTTAGATT TGCCTTGTCTCAAAATAAAGAATTATGTAGTGGCTTTCAAAAATAATTTATTTAAGAAAC AATACAAAAAGTGGGTAGAATTACCCATCACATTTCCCGATCTTAACTATTCAGAATATT GTTTGTCTAGTGATGAGGACTGATGTTTGATTCCAGATTCTTTTAAAATATTATCAACTT GACCTTTCATAGGATTTTGATGACAATTTTCATTATACTACAGAACTGATGTAAGAATTA ATAAAATCATCGCTTTATTCTGTGTTGAACTGTATGGAAGAAGACAATGTATTATGCTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTATTGAACGTGAGACCGTTAATGATTTCCGAGAGAAAATGATGTATAAAGCTATAGACC GTGTTCAAAATATGAAACCAGAAGAGTATGCTCATAAGATTTTGGAATTACAGATGCAAA GTATAATGGAAAAGAAAATGAAAATCAAGAGAAGTATTGCAAAGCAATGCAAGGACAACC CATCATTAATAAGTTTTCTATGCAAAAACTGCAGTGTGCTAGCCTGCTCTGGAGAAGATA TCCACATAATTGAGAAGATGCACCATGTCAACATGACACCAGAGTTCAAGAACCTGTATA TTGTGAGAGGAAACAAGGCACTGCAGACGAAGTTTGCTGACTATCAAACAAATGGCGAGA TAATCTGCAAAAAATGTGGCCAAGCTTGGGGAACGATGATGGTGCACAAAGGCTTAGATT TGCCTTGTCTCAAAATAAAGAATTATGTAGTGGCTTTCAAAAATAATTTATTTAAGAAAC AATACAAAAAGTGGGTAGAATTACCCATCACATTTCCCGATCTTAACTATTCAGAATATT GTTTGTCTAGTGATGAGGACTGATGTTTGATTCCAGATTCTTTTAAAATATTATCAACTT GACCTTTCATAGGATTTTGATGACAATTTTCATTATACTACAGAACTGATGTAAGAATTA ATAAAATCATCGCTTTATTCTGTGTTGAACTGTATGGAAGAAGACAATGTATTATGCTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 97-290, gnl|bosTau2|chr2 (18629519-18629712) | |
| 97-290, gnl|canFam2|chr36 (10683531-10683682) | |
| 97-290, gnl|danRer3|chr22 (44157274-44157134) | |
| 97-290, gnl|dasNov1|scaffold_11824 (127493-127342) | |
| 97-290, gnl|fr1|chrUn (173336130-173336003) | |
| 97-290, gnl|galGal2|chr7 (21898914-21898763) | |
| 97-290, gnl|hg17|chr2 (162950075-162950226) | |
| 97-290, gnl|Hg17|chr2 (162950296-162950103) | |
| 97-290, gnl|mm7|chr2 (62529306-62529457) | |
| 97-290, gnl|Mm7|chr2 (62529527-62529334) | |
| 97-290, gnl|monDom2|scaffold_2 (56934088-56934239) | |
| 97-290, gnl|oryCun1|scaffold_213032 (95621-95472) | |
| 97-290, gnl|panTro1|chr13 (52348251-52348402) | |
| 97-290, gnl|rheMac2|chr12 (25839785-25839936) | |
| 97-290, gnl|rn3|chr3 (44444900-44445051) | |
| 97-290, gnl|tetNig1|chr2 (11950909-11950782) | |
| 97-290, gnl|xenTro1|scaffold_576 (747303-747176) | |
| 380-720, gnl|bosTau2|chr2 (18630388-18630727) | |
| 380-720, gnl|Hg17|chr2 (162949400-162949060) | |
| 380-720, gnl|Mm7|chr2 (62528641-62528310) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 97-290, gnl|bosTau2|chr2 (18629519-18629712) | |
| 97-290, gnl|canFam2|chr36 (10683531-10683682) | |
| 97-290, gnl|danRer3|chr22 (44157274-44157134) | |
| 97-290, gnl|dasNov1|scaffold_11824 (127493-127342) | |
| 97-290, gnl|fr1|chrUn (173336130-173336003) | |
| 97-290, gnl|galGal2|chr7 (21898914-21898763) | |
| 97-290, gnl|hg17|chr2 (162950075-162950226) | |
| 97-290, gnl|Hg17|chr2 (162950296-162950103) | |
| 97-290, gnl|mm7|chr2 (62529306-62529457) | |
| 97-290, gnl|Mm7|chr2 (62529527-62529334) | |
| 97-290, gnl|monDom2|scaffold_2 (56934088-56934239) | |
| 97-290, gnl|oryCun1|scaffold_213032 (95621-95472) | |
| 97-290, gnl|panTro1|chr13 (52348251-52348402) | |
| 97-290, gnl|rheMac2|chr12 (25839785-25839936) | |
| 97-290, gnl|rn3|chr3 (44444900-44445051) | |
| 97-290, gnl|tetNig1|chr2 (11950909-11950782) | |
| 97-290, gnl|xenTro1|scaffold_576 (747303-747176) | |
| 380-720, gnl|bosTau2|chr2 (18630388-18630727) | |
| 380-720, gnl|Hg17|chr2 (162949400-162949060) | |
| 380-720, gnl|Mm7|chr2 (62528641-62528310) |
| Expressed library(ies): 8 entry(ies) | More info |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
| jej (0.197844) | |
| aor (0.195274) | |
| cje (0.165235) | |
| spl (0.143184) | |
| lnt (0.142308) | |
| csk (0.140746) | |
| ova (0.129132) | |
| bla (0.124347) |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (0.197844) | |
| aor (0.195274) | |
| cje (0.165235) | |
| spl (0.143184) | |
| lnt (0.142308) | |
| csk (0.140746) | |
| ova (0.129132) | |
| bla (0.124347) |