Ss1.1-Pig3-SRG8019H10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAACCACTGCCCAACGGGCACTAAGTTTTCCAGGACTGTTTTGTGACTTCCGGGGTCTG GAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCGACAGCATCAGGGCCCAA CTTCTCGCTGGCAGACNTGGAGAGTCCCAGCTACTACAACATAAACCAGGTGACCCTGGG GCGGCGGTCCATCACCTCCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCATCGA TGACAGCGAGATGGAAAGCCCTGTCGATGACGTCTTCTATCCTGGCACAGGCCGCTCCCC AGCAGCTGGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGCCCGGCTTC TCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCTCTCAGGGCAGCTCCCC GCGCATGGCTTTCACTCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCC TCGGGCCACAGCGTCCGCGCTGCACTTCCCCTCCACATCCATCATCCAGCAATCGAGCCC GTACTTCACGCACCCGACCATCCGCTACCACCACCACCACGGGCAGGACTCGCTGAAGGA GTTTGTGCAGTTTGTGTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCCCAACGGTAG CGGCCAGGGCAAAGTCCCGGGGTCATTTTTGCTACCACCGCCGCCTCCAGTGGCCAGACC TGTGCCCCTTCCTATGCATGATTCCAAATCCACCAGCACTGCCCCAGACGGCGCCGCCTT GACTCCTCCATCACCTTCATTCGCAACGACAGGCGCATCCTCTGCCAACCGGTTTGTCAG CATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCCTGGTTCCT CTGATAAGATCGACGAAAGAAATGACAAAATGACAAGAGGTTCCTCAAACGGGGGGAGAA GAAATTTTGAGACGTGGAAAAATCCCCCAGCCCAGCCCAGCCCCACCGAAAAGCAAAAAT TAGACGTCGTCAGCCACTCAGCCCTTCTCTCCTCCAGCCCGGGGACCCCTGCAGGCCCCC AGAAGCAGCCCAGTTCTCTTGGAGAGCCCTCAGAAGAGGTCTCAGTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAACCACTGCCCAACGGGCACTAAGTTTTCCAGGACTGTTTTGTGACTTCCGGGGTCTG GAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCGACAGCATCAGGGCCCAA CTTCTCGCTGGCAGACNTGGAGAGTCCCAGCTACTACAACATAAACCAGGTGACCCTGGG GCGGCGGTCCATCACCTCCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCATCGA TGACAGCGAGATGGAAAGCCCTGTCGATGACGTCTTCTATCCTGGCACAGGCCGCTCCCC AGCAGCTGGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGCCCGGCTTC TCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCTCTCAGGGCAGCTCCCC GCGCATGGCTTTCACTCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCC TCGGGCCACAGCGTCCGCGCTGCACTTCCCCTCCACATCCATCATCCAGCAATCGAGCCC GTACTTCACGCACCCGACCATCCGCTACCACCACCACCACGGGCAGGACTCGCTGAAGGA GTTTGTGCAGTTTGTGTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCCCAACGGTAG CGGCCAGGGCAAAGTCCCGGGGTCATTTTTGCTACCACCGCCGCCTCCAGTGGCCAGACC TGTGCCCCTTCCTATGCATGATTCCAAATCCACCAGCACTGCCCCAGACGGCGCCGCCTT GACTCCTCCATCACCTTCATTCGCAACGACAGGCGCATCCTCTGCCAACCGGTTTGTCAG CATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCCTGGTTCCT CTGATAAGATCGACGAAAGAAATGACAAAATGACAAGAGGTTCCTCAAACGGGGGGAGAA GAAATTTTGAGACGTGGAAAAATCCCCCAGCCCAGCCCAGCCCCACCGAAAAGCAAAAAT TAGACGTCGTCAGCCACTCAGCCCTTCTCTCCTCCAGCCCGGGGACCCCTGCAGGCCCCC AGAAGCAGCCCAGTTCTCTTGGAGAGCCCTCAGAAGAGGTCTCAGTGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 195-351, gnl|bosTau2|chr7 (9278812-9278967) | |
| 195-351, gnl|canFam2|chr20 (52136924-52136759) | |
| 195-351, gnl|danRer3|chr1 (51137265-51137410) | |
| 195-351, gnl|dasNov1|scaffold_227363 (3991-3826) | |
| 195-351, gnl|fr1|chrUn (287152990-287152837) | |
| 195-351, gnl|hg17|chr19 (13047331-13047496) | |
| 195-351, gnl|Hg17|chr19 (13047332-13047486) | |
| 195-351, gnl|loxAfr1|scaffold_24139 (9259-9092) | |
| 195-351, gnl|mm7|chr8 (83312622-83312440) | |
| 195-351, gnl|Mm7|chr8 (83312604-83312447) | |
| 195-351, gnl|monDom2|scaffold_159 (269851-270016) | |
| 195-351, gnl|oryCun1|scaffold_147385 (456-621) | |
| 195-351, gnl|panTro1|chr20 (13655543-13655708) | |
| 195-351, gnl|rheMac2|chr19 (12749665-12749830) | |
| 195-351, gnl|rn3|chr19 (25098588-25098758) | |
| 195-351, gnl|tetNig1|chrUn_random (37427503-37427653) | |
| 195-351, gnl|xenTro1|scaffold_468 (597145-597312) | |
| 418-649, gnl|bosTau2|chr7 (9284231-9284466) | |
| 418-649, gnl|Hg17|chr19 (13053435-13053669) | |
| 418-649, gnl|Mm7|chr8 (83307848-83307622) | |
| 886-1128, gnl|bosTau2|chr7 (9295936-9296180) | |
| 886-1128, gnl|Hg17|chr19 (13066445-13066686) | |
| 886-1128, gnl|Mm7|chr8 (83293496-83293249) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 195-351, gnl|bosTau2|chr7 (9278812-9278967) | |
| 195-351, gnl|canFam2|chr20 (52136924-52136759) | |
| 195-351, gnl|danRer3|chr1 (51137265-51137410) | |
| 195-351, gnl|dasNov1|scaffold_227363 (3991-3826) | |
| 195-351, gnl|fr1|chrUn (287152990-287152837) | |
| 195-351, gnl|hg17|chr19 (13047331-13047496) | |
| 195-351, gnl|Hg17|chr19 (13047332-13047486) | |
| 195-351, gnl|loxAfr1|scaffold_24139 (9259-9092) | |
| 195-351, gnl|mm7|chr8 (83312622-83312440) | |
| 195-351, gnl|Mm7|chr8 (83312604-83312447) | |
| 195-351, gnl|monDom2|scaffold_159 (269851-270016) | |
| 195-351, gnl|oryCun1|scaffold_147385 (456-621) | |
| 195-351, gnl|panTro1|chr20 (13655543-13655708) | |
| 195-351, gnl|rheMac2|chr19 (12749665-12749830) | |
| 195-351, gnl|rn3|chr19 (25098588-25098758) | |
| 195-351, gnl|tetNig1|chrUn_random (37427503-37427653) | |
| 195-351, gnl|xenTro1|scaffold_468 (597145-597312) | |
| 418-649, gnl|bosTau2|chr7 (9284231-9284466) | |
| 418-649, gnl|Hg17|chr19 (13053435-13053669) | |
| 418-649, gnl|Mm7|chr8 (83307848-83307622) | |
| 886-1128, gnl|bosTau2|chr7 (9295936-9296180) | |
| 886-1128, gnl|Hg17|chr19 (13066445-13066686) | |
| 886-1128, gnl|Mm7|chr8 (83293496-83293249) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) |