Non-Coding RNA Search

Ss1.1-Pig3-SRG8019H13.3

Sequence:


               
               CTCCCGGGACTGTGGAGGCTCCTGGTGGCACTGCTGTTTCGTGTTGGACGCGTCTGCCCT
GTGTCTGTCTCCTTCCCCTTCCCCCCAGCCACAGTTTACCTAAAGAGGGCAAATCCTGTA
CAGTTCCTGCAGATTAAAAATATGCAAAGATAGGACCTCAAGTCCTTGTGTAACGGAGGC
GTTCATTCAAGCGGTCACATTCCCAAGATTTACAGTCCTGAAGAGTCTACTTTTGCCCTC
TCATTTTTTCCCATTGAAGTAATAAATCCAGTTGTGGAGACTCAGAAACTTTATGAAGGG
ATATAGTTTGCATTCTGTGCAATGTAATTTTGTGTATGAATTATATTTTTAATTTATGAA
GGGTTTTCAGAAAGAAGGCTAGTAGGGTTAATTATTGGTACATTACGCATGAATAGTGAT
TCTGTTGATAATGCAGTATCTTCTTAGGCTTATGTGTTAACACTAGAAAGGACAAACTGT
ATCTTGATAAATATTTACCTTTAATTACAAAATGAGTAATATACATGCATGATTCTTAAA
CAAAAAAGTTAATTTTTTAAGAAAGTTTCTCCTGTGAAAATTTTATGGTTAACTAGTTAA
ATTTATGGAGAAAATACCCTCAATTGATCAAGTGTAATAAACTGTTTGCAAAGTTAGGAA
GAAAAACAACATAATGATGCTGCAGGTAATGGAAACAAATATAGACAATATTTAACAAAG
ATGGAAGAGTTATCAGTTTTTGAAGGAAGCAGAATTCATTTCCTTTGACATCACACAGGC
TTCAAGAAAGCTAGTAGGTATTGACATCCCCAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCCCGGGACTGTGGAGGCTCCTGGTGGCACTGCTGTTTCGTGTTGGACGCGTCTGCCCT
GTGTCTGTCTCCTTCCCCTTCCCCCCAGCCACAGTTTACCTAAAGAGGGCAAATCCTGTA
CAGTTCCTGCAGATTAAAAATATGCAAAGATAGGACCTCAAGTCCTTGTGTAACGGAGGC
GTTCATTCAAGCGGTCACATTCCCAAGATTTACAGTCCTGAAGAGTCTACTTTTGCCCTC
TCATTTTTTCCCATTGAAGTAATAAATCCAGTTGTGGAGACTCAGAAACTTTATGAAGGG
ATATAGTTTGCATTCTGTGCAATGTAATTTTGTGTATGAATTATATTTTTAATTTATGAA
GGGTTTTCAGAAAGAAGGCTAGTAGGGTTAATTATTGGTACATTACGCATGAATAGTGAT
TCTGTTGATAATGCAGTATCTTCTTAGGCTTATGTGTTAACACTAGAAAGGACAAACTGT
ATCTTGATAAATATTTACCTTTAATTACAAAATGAGTAATATACATGCATGATTCTTAAA
CAAAAAAGTTAATTTTTTAAGAAAGTTTCTCCTGTGAAAATTTTATGGTTAACTAGTTAA
ATTTATGGAGAAAATACCCTCAATTGATCAAGTGTAATAAACTGTTTGCAAAGTTAGGAA
GAAAAACAACATAATGATGCTGCAGGTAATGGAAACAAATATAGACAATATTTAACAAAG
ATGGAAGAGTTATCAGTTTTTGAAGGAAGCAGAATTCATTTCCTTTGACATCACACAGGC
TTCAAGAAAGCTAGTAGGTATTGACATCCCCAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               202-815, gnl|bosTau2|chr3 (22878937-22879534)
               

               
               202-815, gnl|Hg17|chr11 (101724538-101725159)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               202-815, gnl|bosTau2|chr3 (22878937-22879534)
               

               
               202-815, gnl|Hg17|chr11 (101724538-101725159)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               cty (0.10408)

	202-815, gnl\|bosTau2\|chr3 (22878937-22879534)
	202-815, gnl\|Hg17\|chr11 (101724538-101725159)