Non-Coding RNA Search

Ss1.1-Pig3-SRG8019K09.3

Sequence:


               
               GCTGTGGATCATTTTAGTATAAAACCCTGAAACTGGGTGCACAGACAGCTGCTGTTTAAT
ATTTCAAAGTGCCTTACTTCTGGGTTGTTTTATTTAAGAGCTTTGTCGATGTGGCCTCCT
ACTTCTCTTAAAGTTGACTGTGACTTGAGATACGCAAAACATTTAAGGGCCAGACATGAT
ATTAGAGAATGTAAGCGTACAGGCAAAATGAGGGATGGTTTATGGTTGATGGGTAAGTTC
ACAGGACACATCCTATTTAAAAAAAAAAAAAAGTGCAGTTTGTGCTATTGCTGTTTTGTT
TGTACATAAAATTTGAGTTTCCTTTAGCTGGCATATTAAATTTTAAGTTTTGTCTCTTTT
TTTATTCTAATTGTCCTTTACTCAAATAGAAATCAAGGAAAGTTCATCTTAAGGGCAAAG
GCTTGGCTGAGACATATGGGTCATTTGTTGTGAACTTGAACGTGAGTTTGGAGGTCTTTT
TAACACACTTGCATCTCAGAAAACTGTACCCAGTGCTGAATGAAATGGGAGCTATTTACC
TTCCGCACTTGGCAAACTTGAGCTGTTGGACTTAACTGATCTCTATCGATACCTCAGATC
ACTCTGATTTTGTCAGCTGTCCTCTCTGTGAACTTATTTGTGTATTTAGGGCATTTTCTG
ATGGCACTTCCTTAAGCTCTAAATGTATTGGAGAGGGACTCATTCAGAATAATGTGCTTG
TCTTTGTTAACTTTTAATCACTTAAAGTAAACACTTCATCACTTAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGTGGATCATTTTAGTATAAAACCCTGAAACTGGGTGCACAGACAGCTGCTGTTTAAT
ATTTCAAAGTGCCTTACTTCTGGGTTGTTTTATTTAAGAGCTTTGTCGATGTGGCCTCCT
ACTTCTCTTAAAGTTGACTGTGACTTGAGATACGCAAAACATTTAAGGGCCAGACATGAT
ATTAGAGAATGTAAGCGTACAGGCAAAATGAGGGATGGTTTATGGTTGATGGGTAAGTTC
ACAGGACACATCCTATTTAAAAAAAAAAAAAAGTGCAGTTTGTGCTATTGCTGTTTTGTT
TGTACATAAAATTTGAGTTTCCTTTAGCTGGCATATTAAATTTTAAGTTTTGTCTCTTTT
TTTATTCTAATTGTCCTTTACTCAAATAGAAATCAAGGAAAGTTCATCTTAAGGGCAAAG
GCTTGGCTGAGACATATGGGTCATTTGTTGTGAACTTGAACGTGAGTTTGGAGGTCTTTT
TAACACACTTGCATCTCAGAAAACTGTACCCAGTGCTGAATGAAATGGGAGCTATTTACC
TTCCGCACTTGGCAAACTTGAGCTGTTGGACTTAACTGATCTCTATCGATACCTCAGATC
ACTCTGATTTTGTCAGCTGTCCTCTCTGTGAACTTATTTGTGTATTTAGGGCATTTTCTG
ATGGCACTTCCTTAAGCTCTAAATGTATTGGAGAGGGACTCATTCAGAATAATGTGCTTG
TCTTTGTTAACTTTTAATCACTTAAAGTAAACACTTCATCACTTAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               21-759, gnl|bosTau2|chr5 (12588045-12588808)
               

               
               21-759, gnl|Hg17|chr12 (88418908-88418184)
               

               
               21-759, gnl|Mm7|chr10 (98672274-98673222)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-759, gnl|bosTau2|chr5 (12588045-12588808)
               

               
               21-759, gnl|Hg17|chr12 (88418908-88418184)
               

               
               21-759, gnl|Mm7|chr10 (98672274-98673222)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sag (0.182715)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)

	21-759, gnl\|bosTau2\|chr5 (12588045-12588808)
	21-759, gnl\|Hg17\|chr12 (88418908-88418184)
	21-759, gnl\|Mm7\|chr10 (98672274-98673222)