Non-Coding RNA Search

Ss1.1-Pig3-SRG8020B16.5

Sequence:


               
               CTTATCTTGGCTCATGGCTGGGAGGCAGAGTCGATCTTGGTTTGAAGGAACCTGTGATTT
ATGGCTTTGTGAGTCATAGTGTGGAGGGTGATATTGCTTGTAAGTTTGCTGGACACACTG
CACTTTCAGCAGAATCTTGCTTTTCAAGAAACCTAATTACACGGCCCATACTCTGAATTC
ACTGGTGCTGGAGAGATGGATGCAGAGTCATTTAAAGACACAGAATACTGTGCCACACAG
AAGTTGTGTTTAACGGATTAGCAGATTAGTTAACAAGGACACAGACATGGCTTAGACAGT
TTATAAAGTGACTATTTTAAGTCTTTAATCCCTTTGTGTTATTTCTTGATTGCTTTGATG
AGGACCAGGATTTTTTGGTAGGATTTTTTGGTTTTGGTAGCTTTTCTTGTTTTCACTCTT
TGTATTGGGATGGGGAAAGGTATACACACATTCCTAGTCCCCCTCTCTCTCTATCTTGCA
CACACAGAGACACACACTCTGCTCTTATAAGACCAATGCTTCAGAAACCAACACTTTCAT
AGCCTGGGGTGGGGGTGGGGGGAATTCCCTAGATTTGATGACATCTGACACATATGAGGG
CCTGTGTTTTTCCACAAAGGCGATTATTTTCCCCATGGGAAATTTAGAAAGAATATGATG
AAAATGTAAGGAAATTAGAATCCATAAAATAACTTTTGAGCCTGTTTGTTACTTCTTCTT
AGATGTATTGAGACCATAGACATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTATCTTGGCTCATGGCTGGGAGGCAGAGTCGATCTTGGTTTGAAGGAACCTGTGATTT
ATGGCTTTGTGAGTCATAGTGTGGAGGGTGATATTGCTTGTAAGTTTGCTGGACACACTG
CACTTTCAGCAGAATCTTGCTTTTCAAGAAACCTAATTACACGGCCCATACTCTGAATTC
ACTGGTGCTGGAGAGATGGATGCAGAGTCATTTAAAGACACAGAATACTGTGCCACACAG
AAGTTGTGTTTAACGGATTAGCAGATTAGTTAACAAGGACACAGACATGGCTTAGACAGT
TTATAAAGTGACTATTTTAAGTCTTTAATCCCTTTGTGTTATTTCTTGATTGCTTTGATG
AGGACCAGGATTTTTTGGTAGGATTTTTTGGTTTTGGTAGCTTTTCTTGTTTTCACTCTT
TGTATTGGGATGGGGAAAGGTATACACACATTCCTAGTCCCCCTCTCTCTCTATCTTGCA
CACACAGAGACACACACTCTGCTCTTATAAGACCAATGCTTCAGAAACCAACACTTTCAT
AGCCTGGGGTGGGGGTGGGGGGAATTCCCTAGATTTGATGACATCTGACACATATGAGGG
CCTGTGTTTTTCCACAAAGGCGATTATTTTCCCCATGGGAAATTTAGAAAGAATATGATG
AAAATGTAAGGAAATTAGAATCCATAAAATAACTTTTGAGCCTGTTTGTTACTTCTTCTT
AGATGTATTGAGACCATAGACATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-485, gnl|bosTau2|chr11 (23307302-23306833)
               

               
               1-485, gnl|Hg17|chr2 (46502431-46502879)
               

               
               1-485, gnl|Mm7|chr17 (85113243-85113668)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-485, gnl|bosTau2|chr11 (23307302-23306833)
               

               
               1-485, gnl|Hg17|chr2 (46502431-46502879)
               

               
               1-485, gnl|Mm7|chr17 (85113243-85113668)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cmu (0.186393)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.186393)

	1-485, gnl\|bosTau2\|chr11 (23307302-23306833)
	1-485, gnl\|Hg17\|chr2 (46502431-46502879)
	1-485, gnl\|Mm7\|chr17 (85113243-85113668)