Non-Coding RNA Search

Ss1.1-Pig3-SRG8020B23.3

Sequence:


               
               TAGTGCAGAGAGGCCCCATCATGCCCTGTAGCATCACCACTTCCCATCTTGACCTGGAAC
CACAGCTTCATCCCAGAAGCCCACAGTTTCAGCTCCTCCCCACTAGCACCACTTCAGCTC
CCAAGAATTCTCAACAGGGAAGAGCCACAGGGTAGGCAGGCCTACCACTTCCAGAGTGGG
CCAAGGGAGCATCCAAAGGTATAAGTGGAACGCCAATTCCTGAAAGCAGTGTGGCCCGAG
ACCTGTCTCCTTCCCTGATGGTCATATTTCTTCCTGCTTCTGCTGGGCCACCAGCTACCT
CAGTGTCCCACTGCCTGCTTCCTCTTTGTTAAATGTCACATTTCCAGCTGGCAGCCTTTG
CCTAGGCCATCTTTGCAGAGTGCACTGGGGTAGAACTATGCTGAGCTCATGCACATGTAC
TCTGAAATATGTTCTAGCTGGTGGGATAATGCTTTTGTAGTCCCAGGCCCACCCACTAAC
GACACCACACTCAGCATCAGGGTCTCATATTTCACCCCAGGCTCAACTGAGGATGTGGCT
TATTAAACATGGAAGTGCAAAAAAAAAAAAAAAAAAGGCCGTTTTAAATTTTCCTTGGGG
GGGCCAAAGTTAACCCGTCCCCATTTTTTTTGAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGTGCAGAGAGGCCCCATCATGCCCTGTAGCATCACCACTTCCCATCTTGACCTGGAAC
CACAGCTTCATCCCAGAAGCCCACAGTTTCAGCTCCTCCCCACTAGCACCACTTCAGCTC
CCAAGAATTCTCAACAGGGAAGAGCCACAGGGTAGGCAGGCCTACCACTTCCAGAGTGGG
CCAAGGGAGCATCCAAAGGTATAAGTGGAACGCCAATTCCTGAAAGCAGTGTGGCCCGAG
ACCTGTCTCCTTCCCTGATGGTCATATTTCTTCCTGCTTCTGCTGGGCCACCAGCTACCT
CAGTGTCCCACTGCCTGCTTCCTCTTTGTTAAATGTCACATTTCCAGCTGGCAGCCTTTG
CCTAGGCCATCTTTGCAGAGTGCACTGGGGTAGAACTATGCTGAGCTCATGCACATGTAC
TCTGAAATATGTTCTAGCTGGTGGGATAATGCTTTTGTAGTCCCAGGCCCACCCACTAAC
GACACCACACTCAGCATCAGGGTCTCATATTTCACCCCAGGCTCAACTGAGGATGTGGCT
TATTAAACATGGAAGTGCAAAAAAAAAAAAAAAAAAGGCCGTTTTAAATTTTCCTTGGGG
GGGCCAAAGTTAACCCGTCCCCATTTTTTTTGAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               225-559, gnl|bosTau2|chr22 (37853142-37853457)
               

               
               225-559, gnl|Hg17|chr3 (49428615-49428913)
               

               
               225-559, gnl|Mm7|chr9 (108036714-108036390)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               225-559, gnl|bosTau2|chr22 (37853142-37853457)
               

               
               225-559, gnl|Hg17|chr3 (49428615-49428913)
               

               
               225-559, gnl|Mm7|chr9 (108036714-108036390)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cki (0.165235)
               

               
               lnt (0.142308)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)
               

               
               lnt (0.142308)

	225-559, gnl\|bosTau2\|chr22 (37853142-37853457)
	225-559, gnl\|Hg17\|chr3 (49428615-49428913)
	225-559, gnl\|Mm7\|chr9 (108036714-108036390)