Non-Coding RNA Search

Ss1.1-Pig3-SRG8020C06.5

Sequence:


               
               TTGACCGAGGAGGTCAATAAGCCATGTTGGATGCCTGGCTCCATTCATAACATCTACATA
ACCTTATCAGGTCCTTTACTGTTTGGACCTTGTTTTCCCCATCTGAGAAACGAGAGTCAT
AGTTAAGGTCTTGAAAGGAGATGGTGAGCACATAAACTAGCAGAGGGTCTAGTTAAAAGT
TGTGGGCTTATCTGGTCACTTATGGAGACAACAAGAGAAAGTGGAGACCCTGGTGGTGGG
AGGGCCAGTCATGGAGACGCACCTCCCAGCCCGGGGTCTGAGGGACAGCTACTGACCTGG
AGCTGGCATATTTAGTCCAAGGACACATCCAGCCCTTGATGACTCCAGAGGGAGGCAGCT
GACCTGGACCTTCCTCCCCTCCCTTCCTCAGCCCTCCTGCTGGGGCTCCGCAGTGGCCAA
ACCCAGTTATATTGGTCAGGGTTCTCCAGAGAAACAGAACCAACAAGATGTGTATATGTG
GAAAGAGTTACAGTTCAAAGTCCAAAGGCAGCCAGCTGGCATAATTCCCTCTTGCTCAAG
GGGAATCATCCTTTTGTTCTTTTCAAGCCTTCAACTGATTAACTGAGGCCCACCACATTA
TGGAGGGCAATCTGCTTTATTCCGACTCCATTGATGTAAATGTAAATCTCATCTGGAAAC
ACCTTCACACAAAGATCCGGAATAATGTTGGACCAACTATCTGGATACTGTGGCCCAATG
AAGTTAACACATAAAATTCACCATCACATCAACAGAAGCCAGAAATGCAAGGGAGTCCTT
TGATGCAGCCTATCCAGATCCTCCTTAATATTTTCAAATATCGATTACATGTTGCAAGGA
TAATATTTTGGATGTATAAGATTGAATAAAATATTGTATTAACATTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGACCGAGGAGGTCAATAAGCCATGTTGGATGCCTGGCTCCATTCATAACATCTACATA
ACCTTATCAGGTCCTTTACTGTTTGGACCTTGTTTTCCCCATCTGAGAAACGAGAGTCAT
AGTTAAGGTCTTGAAAGGAGATGGTGAGCACATAAACTAGCAGAGGGTCTAGTTAAAAGT
TGTGGGCTTATCTGGTCACTTATGGAGACAACAAGAGAAAGTGGAGACCCTGGTGGTGGG
AGGGCCAGTCATGGAGACGCACCTCCCAGCCCGGGGTCTGAGGGACAGCTACTGACCTGG
AGCTGGCATATTTAGTCCAAGGACACATCCAGCCCTTGATGACTCCAGAGGGAGGCAGCT
GACCTGGACCTTCCTCCCCTCCCTTCCTCAGCCCTCCTGCTGGGGCTCCGCAGTGGCCAA
ACCCAGTTATATTGGTCAGGGTTCTCCAGAGAAACAGAACCAACAAGATGTGTATATGTG
GAAAGAGTTACAGTTCAAAGTCCAAAGGCAGCCAGCTGGCATAATTCCCTCTTGCTCAAG
GGGAATCATCCTTTTGTTCTTTTCAAGCCTTCAACTGATTAACTGAGGCCCACCACATTA
TGGAGGGCAATCTGCTTTATTCCGACTCCATTGATGTAAATGTAAATCTCATCTGGAAAC
ACCTTCACACAAAGATCCGGAATAATGTTGGACCAACTATCTGGATACTGTGGCCCAATG
AAGTTAACACATAAAATTCACCATCACATCAACAGAAGCCAGAAATGCAAGGGAGTCCTT
TGATGCAGCCTATCCAGATCCTCCTTAATATTTTCAAATATCGATTACATGTTGCAAGGA
TAATATTTTGGATGTATAAGATTGAATAAAATATTGTATTAACATTCA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               483-748, gnl|bosTau2|chr15 (8958638-8958376)
               

               
               483-748, gnl|Hg17|chr11 (109864651-109864394)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               483-748, gnl|bosTau2|chr15 (8958638-8958376)
               

               
               483-748, gnl|Hg17|chr11 (109864651-109864394)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eli (0.151814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eli (0.151814)

	483-748, gnl\|bosTau2\|chr15 (8958638-8958376)
	483-748, gnl\|Hg17\|chr11 (109864651-109864394)