Non-Coding RNA Search

Ss1.1-Pig3-SRG8020H16.3

Sequence:


               
               GCAGCTGGACGAATGTGGTTGTCGCATGGCTGGCACTGTCCGCCGAAGAGACCTGGAGCT
GTTGAAGCAAACTTCAAAAGCACATTAGAGAGTGACTGTAACTTAAGTGCTGGGGGGAAA
AAATGTGAACTAACTTATTTAATTTATGGCATTTTAGAATGACACTGTTAACCCAATGGA
ACCATTTCCCTGTTTGATTCAGAAAGGGGAGAAAAGAGTTTAAAAGTGATGTGATTGCTT
GAATACCAGCTCACGCACCTTCTAGTTGTACACAATGTTCAAGAATTTATTTGTATTTGT
TAGGCTGGTATAATTCAGAGAGCAGTTATTCCTTAACTCCCACCCCTGTGTTTTGTAGTG
ACCATAAGCAGTGCTTCACCTTTTGAATACTGGGATGTTGTGTGGGGAGGTGGGGGTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGCTGGACGAATGTGGTTGTCGCATGGCTGGCACTGTCCGCCGAAGAGACCTGGAGCT
GTTGAAGCAAACTTCAAAAGCACATTAGAGAGTGACTGTAACTTAAGTGCTGGGGGGAAA
AAATGTGAACTAACTTATTTAATTTATGGCATTTTAGAATGACACTGTTAACCCAATGGA
ACCATTTCCCTGTTTGATTCAGAAAGGGGAGAAAAGAGTTTAAAAGTGATGTGATTGCTT
GAATACCAGCTCACGCACCTTCTAGTTGTACACAATGTTCAAGAATTTATTTGTATTTGT
TAGGCTGGTATAATTCAGAGAGCAGTTATTCCTTAACTCCCACCCCTGTGTTTTGTAGTG
ACCATAAGCAGTGCTTCACCTTTTGAATACTGGGATGTTGTGTGGGGAGGTGGGGGTTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-410, gnl|bosTau2|chr8 (22623334-22622920)
               

               
               1-410, gnl|Hg17|chr9 (71529754-71529343)
               

               
               1-410, gnl|Mm7|chr19 (21554397-21554793)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-410, gnl|bosTau2|chr8 (22623334-22622920)
               

               
               1-410, gnl|Hg17|chr9 (71529754-71529343)
               

               
               1-410, gnl|Mm7|chr19 (21554397-21554793)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nlu (0.191681)
               

               
               cbl (0.114797)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               cbl (0.114797)
               

               
               cty (0.10408)

	1-410, gnl\|bosTau2\|chr8 (22623334-22622920)
	1-410, gnl\|Hg17\|chr9 (71529754-71529343)
	1-410, gnl\|Mm7\|chr19 (21554397-21554793)