Non-Coding RNA Search

Ss1.1-Pig3-SRG8020M23.5

Sequence:


               
               AATCAACTTTTATTTTGCACCTGAAATCCTGGGATTGTAACTGAAACAATTCAAAAAAAT
TTTTTTCTCTGTCTAAAATTTGTAATCAATGATTTATTAAAAAATCTTTTGATCTGCTAA
AGCTTGGAAATCTTTAAGTCCAAAAAATGGAAATTCAGCAAACTAGATTTAGGAATTAAT
TGTAAAGACTTCCATTTTTCTTTAATGGAATTCTTTCATTTTCAGGGAATTACTTTTAAA
CGTGTAGGTGTTCCTTCTACAATGGATTTAGTTAAATCTAAAAGCATGGATGCCATCAGG
TATGCTTTCTGACCTTGCTGAATAATTTTTTCTCTTGTATTAGGCTATACATCTTTAAGC
TCTCCTAGTTCAAATATCAGAAAATTTTATCACCAGTTTTACCAGCAGACATTTAATTAC
ATTAAAATACAAAAATGTTGCTCTTTCTTTTCCCATTCATTCTCTTGTCTTTAATATTCT
CCCTTTGTCTTGACCAAGGAAATTTACTATTTTTAAACCATAGGTCTCTGGCTTCCGTTT
CTTATGCTGCTGTTGATTTTTTCCGACCATCAGCTCAGAGACTGATAGAAGAGAAAGGGG
CAGTGGATGCATTGGCTGCAGCATTAGCTCACATCTCTGGCGCATCAAGTTTTGAACCAC
GATCTTTGATCACTTCTGATAAGGTATAAATCTGTGAGAAAATTGTATGTGGTTAAGAAA
GATTAAAACTGAACCATAGATATCTCTCTATCTGGAGTGAAATATAGGACATATTCACTT
TGCACAGTACTGTGTTACACGAAACTTGAGTAACAGAACCTATTCATTTGTTTGCCATGA
CCTGTGCAAATCGAGAAATAGACTCTGTGCAGCTAACACACTGTCCTGCAAAGTAAGGAT
TGCTTGTGTGTGTGTGTGTGTATGTGTGTAAGTACAATACCATCTTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATCAACTTTTATTTTGCACCTGAAATCCTGGGATTGTAACTGAAACAATTCAAAAAAAT
TTTTTTCTCTGTCTAAAATTTGTAATCAATGATTTATTAAAAAATCTTTTGATCTGCTAA
AGCTTGGAAATCTTTAAGTCCAAAAAATGGAAATTCAGCAAACTAGATTTAGGAATTAAT
TGTAAAGACTTCCATTTTTCTTTAATGGAATTCTTTCATTTTCAGGGAATTACTTTTAAA
CGTGTAGGTGTTCCTTCTACAATGGATTTAGTTAAATCTAAAAGCATGGATGCCATCAGG
TATGCTTTCTGACCTTGCTGAATAATTTTTTCTCTTGTATTAGGCTATACATCTTTAAGC
TCTCCTAGTTCAAATATCAGAAAATTTTATCACCAGTTTTACCAGCAGACATTTAATTAC
ATTAAAATACAAAAATGTTGCTCTTTCTTTTCCCATTCATTCTCTTGTCTTTAATATTCT
CCCTTTGTCTTGACCAAGGAAATTTACTATTTTTAAACCATAGGTCTCTGGCTTCCGTTT
CTTATGCTGCTGTTGATTTTTTCCGACCATCAGCTCAGAGACTGATAGAAGAGAAAGGGG
CAGTGGATGCATTGGCTGCAGCATTAGCTCACATCTCTGGCGCATCAAGTTTTGAACCAC
GATCTTTGATCACTTCTGATAAGGTATAAATCTGTGAGAAAATTGTATGTGGTTAAGAAA
GATTAAAACTGAACCATAGATATCTCTCTATCTGGAGTGAAATATAGGACATATTCACTT
TGCACAGTACTGTGTTACACGAAACTTGAGTAACAGAACCTATTCATTTGTTTGCCATGA
CCTGTGCAAATCGAGAAATAGACTCTGTGCAGCTAACACACTGTCCTGCAAAGTAAGGAT
TGCTTGTGTGTGTGTGTGTGTATGTGTGTAAGTACAATACCATCTTAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               13-865, gnl|bosTau2|chr28 (16474313-16473464)
               

               
               13-865, gnl|Hg17|chr10 (70365211-70367990)
               

               
               13-865, gnl|Mm7|chr10 (62144239-62143503)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-865, gnl|bosTau2|chr28 (16474313-16473464)
               

               
               13-865, gnl|Hg17|chr10 (70365211-70367990)
               

               
               13-865, gnl|Mm7|chr10 (62144239-62143503)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	13-865, gnl\|bosTau2\|chr28 (16474313-16473464)
	13-865, gnl\|Hg17\|chr10 (70365211-70367990)
	13-865, gnl\|Mm7\|chr10 (62144239-62143503)