Non-Coding RNA Search

Ss1.1-Pig3-SRG8021B12.3

Sequence:


               
               CAGGAACTCCCTGAGGTTTAAACTTTTAAGTCTAACTTTTCAAGATGGATTTGTTCTTTT
AGAATTTTATCAAATTTTGTTTATTTGCAAGATTAGATAAGAAAATTGATGTGTTTTTAT
CATTGAAGCACCATCTTGTGATAGTGATAACATAAGTATGATTGTTTTCTGTATTTTGAG
GTCCCTGATCCAAAGGCCATTTTGCTGGCTTTTTCCCGATTTGCTTTCTGGCATCAGAGA
TGTTTTCACTTAACATCTAATCTTTTAAATAGTTACTTATAAATATATTATTTCCAGTTA
ATTTCTGATTCCCCTTACTCTTCCATTTATTTTCAGTTTTCACTATGCTAGAGTAGATTT
TGATACGAGATAATAATTCTTACTATTTTTTTTGAAAAGAAATTTTGTTTGATGAATTGA
TGGCAAGTTAAAAAGGTGTATCCCTATTTTCACCTATTCGTATTCATATTCCCGTTTGTT
TAGGGGCATTACTCAGTTTCCCCTTTAGTATAAAGATGTTTTGTAAAACAGAATTACCTT
GGTGTGCTTGATTACTTATATGGTGACCAATTTTAACCTTAGTGTATCCACCTTTGAGGG
GAGGGACTCTCATTTCTCTCAGGGTGTTTTTTTTTTTTTTTGACTGTTAAGTATGTTAAA
AATTGTTGCCTCTACCTCACATGTTTTTAAAAATTATTACTTGAAGTTTTTATTAAATAA
ATTGTTTTCTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGAACTCCCTGAGGTTTAAACTTTTAAGTCTAACTTTTCAAGATGGATTTGTTCTTTT
AGAATTTTATCAAATTTTGTTTATTTGCAAGATTAGATAAGAAAATTGATGTGTTTTTAT
CATTGAAGCACCATCTTGTGATAGTGATAACATAAGTATGATTGTTTTCTGTATTTTGAG
GTCCCTGATCCAAAGGCCATTTTGCTGGCTTTTTCCCGATTTGCTTTCTGGCATCAGAGA
TGTTTTCACTTAACATCTAATCTTTTAAATAGTTACTTATAAATATATTATTTCCAGTTA
ATTTCTGATTCCCCTTACTCTTCCATTTATTTTCAGTTTTCACTATGCTAGAGTAGATTT
TGATACGAGATAATAATTCTTACTATTTTTTTTGAAAAGAAATTTTGTTTGATGAATTGA
TGGCAAGTTAAAAAGGTGTATCCCTATTTTCACCTATTCGTATTCATATTCCCGTTTGTT
TAGGGGCATTACTCAGTTTCCCCTTTAGTATAAAGATGTTTTGTAAAACAGAATTACCTT
GGTGTGCTTGATTACTTATATGGTGACCAATTTTAACCTTAGTGTATCCACCTTTGAGGG
GAGGGACTCTCATTTCTCTCAGGGTGTTTTTTTTTTTTTTTGACTGTTAAGTATGTTAAA
AATTGTTGCCTCTACCTCACATGTTTTTAAAAATTATTACTTGAAGTTTTTATTAAATAA
ATTGTTTTCTTA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               11-728, gnl|bosTau2|chr28 (16896175-16896894)
               

               
               11-728, gnl|Hg17|chr10 (69844568-69843838)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-728, gnl|bosTau2|chr28 (16896175-16896894)
               

               
               11-728, gnl|Hg17|chr10 (69844568-69843838)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fty (0.17584)
               

               
               nbm (0.0993246)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               nbm (0.0993246)

	11-728, gnl\|bosTau2\|chr28 (16896175-16896894)
	11-728, gnl\|Hg17\|chr10 (69844568-69843838)