Ss1.1-Pig3-SRG8021B23.3
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CCCAGTGTTAAAGGACATCCTCGGGAGGATCTCCAGGCAGCCCAGCGAGCTGGAGAGCCA
CGCGGATCACCTGTACGACACCATCTTAGCCTCCCTGGACAGGCTGGCTGGCTGCACCCT
CGTCCCTGACGGCACGCCCATGGCACACAGGAGCGCCAGTGTGAAGGGGATTAGCCTGGC
ATCTTCTCAGCCAGAGATATAATCTGTCAGCCAAGACTTGGCTAGTGGGAAACTTCCAGA
AGTCCTTTTACAGAGCTCCTAAACTAGTCCACCTGCTGAGATCATTTAAAGAAGGCTGGT
ATGAGGAAGAAGGTACCAAATACTTGGTATTCTCAGGCAAACGAGAGGACCCAAGAGACT
GAAAAAAATGACTGGTGGGCCAGGAACTTGGGTCTTTTCATAAAATGAAGCTTAGGCTTA
TAAATCCCTCTTTGAAGACTAGAAGAGACTTTAACTCTCCAAATTAATAGAAAGTTCTGA
ACAAATAGAACCTCTACAAATTACTTTGGACTGTTATGGACTGTTAGGGTACTTTTATCA
TCTGAAGTGCTCAAGGCTCCATCTGCCTGCCTGCCTAATATCTTAAAGGGAAATGTGATA
GGGAACTGCCCTTAAACTTTAGCTGGGCTGTGGACGATGTATCCACCTAAAAAGGAACCT
CAAGGAACCTCAAGGAGGAGGCAGCCCTCTGTTCCTACTCTCCCTTCAAAGAGTAGTCCG
AGGTCAGGGGAGGGCATGGGTAGGATCACACACCCTGGTTAACTACAGAAGCTAAGGCTG
TTGACAGCGAAGGAAAAAAAGGGAATTCTTTGCTGCTTTGGGAGTTGACAAGTAAGTACC
CTGTAGGAAAAAAGAATCTATGGATCAGCTATTTAAAATCAGTTGTATGGATTTTTAAAG
CAAAATGATCAGCTATTGCTGGTAACCACAGATTCTACAAAAACAAGAAAGCACTTAAAA
AAAAGTTTATTGGGCCACGAATGAATGTGAGAAGGGGAAAGCACTTTCCCCATAGGTTTT
TACTTAGCATTACAGTGGGCTAAAATTTAGAGGAGTTTTTCACATTTAAGTATGTGAGAC
AATCTTTTTTTCAAATTCCAGATTCTCATTTGAGGAGAATGCTTAAAAAAGGAAGATCTT
TTAAATTTATAAACAAGTTACCTCACCCTGGAGAAGGTAACAGTAGAACAGTTATTCTCA
TAAAGCAGATTTCTGATATCCCCTCAGAACAAAACATATAAAATTATTCTCTGTAAAGGA
AGTTTGGGACTTTAGTTTCAGGGGCTGAGCCACATAATCTTAATACCATCTCACTCACCT
CTATGTGAACTAAAATGCTATTTATTATTAAATGTGACTTTTCTGCTTTAAAATTTTTCA
GAGTTTATGCCAGAAGTAAACTGTTAAGTTATAATATTTAAAGAATAACTATGAAGCAAA
ACTGTGTAAAATTCAAAAGCACCTATATAAAATGCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCCAGTGTTAAAGGACATCCTCGGGAGGATCTCCAGGCAGCCCAGCGAGCTGGAGAGCCA
CGCGGATCACCTGTACGACACCATCTTAGCCTCCCTGGACAGGCTGGCTGGCTGCACCCT
CGTCCCTGACGGCACGCCCATGGCACACAGGAGCGCCAGTGTGAAGGGGATTAGCCTGGC
ATCTTCTCAGCCAGAGATATAATCTGTCAGCCAAGACTTGGCTAGTGGGAAACTTCCAGA
AGTCCTTTTACAGAGCTCCTAAACTAGTCCACCTGCTGAGATCATTTAAAGAAGGCTGGT
ATGAGGAAGAAGGTACCAAATACTTGGTATTCTCAGGCAAACGAGAGGACCCAAGAGACT
GAAAAAAATGACTGGTGGGCCAGGAACTTGGGTCTTTTCATAAAATGAAGCTTAGGCTTA
TAAATCCCTCTTTGAAGACTAGAAGAGACTTTAACTCTCCAAATTAATAGAAAGTTCTGA
ACAAATAGAACCTCTACAAATTACTTTGGACTGTTATGGACTGTTAGGGTACTTTTATCA
TCTGAAGTGCTCAAGGCTCCATCTGCCTGCCTGCCTAATATCTTAAAGGGAAATGTGATA
GGGAACTGCCCTTAAACTTTAGCTGGGCTGTGGACGATGTATCCACCTAAAAAGGAACCT
CAAGGAACCTCAAGGAGGAGGCAGCCCTCTGTTCCTACTCTCCCTTCAAAGAGTAGTCCG
AGGTCAGGGGAGGGCATGGGTAGGATCACACACCCTGGTTAACTACAGAAGCTAAGGCTG
TTGACAGCGAAGGAAAAAAAGGGAATTCTTTGCTGCTTTGGGAGTTGACAAGTAAGTACC
CTGTAGGAAAAAAGAATCTATGGATCAGCTATTTAAAATCAGTTGTATGGATTTTTAAAG
CAAAATGATCAGCTATTGCTGGTAACCACAGATTCTACAAAAACAAGAAAGCACTTAAAA
AAAAGTTTATTGGGCCACGAATGAATGTGAGAAGGGGAAAGCACTTTCCCCATAGGTTTT
TACTTAGCATTACAGTGGGCTAAAATTTAGAGGAGTTTTTCACATTTAAGTATGTGAGAC
AATCTTTTTTTCAAATTCCAGATTCTCATTTGAGGAGAATGCTTAAAAAAGGAAGATCTT
TTAAATTTATAAACAAGTTACCTCACCCTGGAGAAGGTAACAGTAGAACAGTTATTCTCA
TAAAGCAGATTTCTGATATCCCCTCAGAACAAAACATATAAAATTATTCTCTGTAAAGGA
AGTTTGGGACTTTAGTTTCAGGGGCTGAGCCACATAATCTTAATACCATCTCACTCACCT
CTATGTGAACTAAAATGCTATTTATTATTAAATGTGACTTTTCTGCTTTAAAATTTTTCA
GAGTTTATGCCAGAAGTAAACTGTTAAGTTATAATATTTAAAGAATAACTATGAAGCAAA
ACTGTGTAAAATTCAAAAGCACCTATATAAAATGCA
|
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4-179, gnl|bosTau2|chr11 (42145967-42146142) |
|
4-179, gnl|Hg17|chr2 (65221319-65221495) |
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4-179, gnl|Mm7|chr11 (20182605-20182432) |
| |
|
250-373, gnl|bosTau2|chr11 (42147433-42147553) |
|
250-373, gnl|canFam2|chr10 (67709924-67710551) |
|
250-373, gnl|dasNov1|scaffold_10080 (3120-3772) |
|
250-373, gnl|echTel1|scaffold_285040 (126004-125394) |
|
250-373, gnl|hg17|chr2 (65222399-65223035) |
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250-373, gnl|Hg17|chr2 (65222726-65222881) |
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250-373, gnl|loxAfr1|scaffold_6520 (39604-38967) |
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250-373, gnl|mm7|chr11 (20181514-20181017) |
|
250-373, gnl|Mm7|chr11 (20181214-20181109) |
|
250-373, gnl|monDom2|scaffold_1 (30717267-30717922) |
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250-373, gnl|oryCun1|scaffold_205675 (31216-31795) |
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250-373, gnl|panTro1|chr12 (67455292-67455928) |
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250-373, gnl|rheMac2|chr13 (65302486-65303118) |
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250-373, gnl|rn3|chr14 (101051333-101050797) |
| |
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413-1339, gnl|bosTau2|chr11 (42147553-42148447) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
4-179, gnl|bosTau2|chr11 (42145967-42146142) |
|
4-179, gnl|Hg17|chr2 (65221319-65221495) |
|
4-179, gnl|Mm7|chr11 (20182605-20182432) |
| |
|
250-373, gnl|bosTau2|chr11 (42147433-42147553) |
|
250-373, gnl|canFam2|chr10 (67709924-67710551) |
|
250-373, gnl|dasNov1|scaffold_10080 (3120-3772) |
|
250-373, gnl|echTel1|scaffold_285040 (126004-125394) |
|
250-373, gnl|hg17|chr2 (65222399-65223035) |
|
250-373, gnl|Hg17|chr2 (65222726-65222881) |
|
250-373, gnl|loxAfr1|scaffold_6520 (39604-38967) |
|
250-373, gnl|mm7|chr11 (20181514-20181017) |
|
250-373, gnl|Mm7|chr11 (20181214-20181109) |
|
250-373, gnl|monDom2|scaffold_1 (30717267-30717922) |
|
250-373, gnl|oryCun1|scaffold_205675 (31216-31795) |
|
250-373, gnl|panTro1|chr12 (67455292-67455928) |
|
250-373, gnl|rheMac2|chr13 (65302486-65303118) |
|
250-373, gnl|rn3|chr14 (101051333-101050797) |
| |
|
413-1339, gnl|bosTau2|chr11 (42147553-42148447) |
|
elu (0.385356) |
|
liv (0.146284) |
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thg (0.126791) |
|
eep (0.122564) |
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pgl (0.118483) |
|
elu (0.385356) |
|
liv (0.146284) |
|
thg (0.126791) |
|
eep (0.122564) |
|
pgl (0.118483) |
