Ss1.1-Pig3-SRG8021D02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAACATGCATAACTGAAATGGTTTTTTTTTTTTTGCTCAGCAGGTATCAGGTATAAATA AGAATGAACTAGGGGGCCATGATGCGAAACCAAAAATGAAGCAGCTACGTGTAGGTAATA GTTTCTAGTCTGAACCGTTATCTGAATTTTGTGGCTTCGTATGTATTATTTTATATTGTA CTTTGCCCATTATCAATGGCTTGGACTTTGATGAGAAATCCCATAGTTTTTAACATCACA AAAATGAGAATATTTGGACAGTGTATTCTAGAAAGCAGTATACTAACTGAAGTGAATGCT TGTATATATTAAGATAGGCTTCAACCTCTTTCTCTAATGCCTTAACTGTCAAGTAATTAA AACTTTTAAACGCATAGGGTTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGTG ACAGCAGGTACCGATGCTGTCAGTGTTTAACACTATGTGTTTAGCTGTGTTTATGCTACA AAAGTGCAATATTAGATACTAGCTAGATAGTACTGCTGCCTCGTATAACTCCGGAGAAAA CAGGATTTGATTAACTGAGTGCACGTGTTTAAGTTACTCATACTGTCCTTAGCTTGGATG CAGTGCCATGTGGATTTATGTGGCTGCTATTTTTATTTACTTTGCATTACTTTGATTAAC AACCTTGGATGGAGAGCTAAACATTCCCTCTTTTTTCCTGACCGGCAATGGCCCTTTAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAACATGCATAACTGAAATGGTTTTTTTTTTTTTGCTCAGCAGGTATCAGGTATAAATA AGAATGAACTAGGGGGCCATGATGCGAAACCAAAAATGAAGCAGCTACGTGTAGGTAATA GTTTCTAGTCTGAACCGTTATCTGAATTTTGTGGCTTCGTATGTATTATTTTATATTGTA CTTTGCCCATTATCAATGGCTTGGACTTTGATGAGAAATCCCATAGTTTTTAACATCACA AAAATGAGAATATTTGGACAGTGTATTCTAGAAAGCAGTATACTAACTGAAGTGAATGCT TGTATATATTAAGATAGGCTTCAACCTCTTTCTCTAATGCCTTAACTGTCAAGTAATTAA AACTTTTAAACGCATAGGGTTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGTG ACAGCAGGTACCGATGCTGTCAGTGTTTAACACTATGTGTTTAGCTGTGTTTATGCTACA AAAGTGCAATATTAGATACTAGCTAGATAGTACTGCTGCCTCGTATAACTCCGGAGAAAA CAGGATTTGATTAACTGAGTGCACGTGTTTAAGTTACTCATACTGTCCTTAGCTTGGATG CAGTGCCATGTGGATTTATGTGGCTGCTATTTTTATTTACTTTGCATTACTTTGATTAAC AACCTTGGATGGAGAGCTAAACATTCCCTCTTTTTTCCTGACCGGCAATGGCCCTTTAAC |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-388, gnl|bosTau2|chr14 (42667249-42667631) | |
| 1-388, gnl|canFam2|chr29 (42371067-42371486) | |
| 1-388, gnl|dasNov1|scaffold_115786 (4273-4686) | |
| 1-388, gnl|echTel1|scaffold_91132 (6194-6578) | |
| 1-388, gnl|hg17|chr8 (95787907-95788327) | |
| 1-388, gnl|Hg17|chr8 (95787936-95788324) | |
| 1-388, gnl|mm7|chr4 (11259967-11259582) | |
| 1-388, gnl|Mm7|chr4 (11260018-11259566) | |
| 1-388, gnl|monDom2|scaffold_3 (70861284-70860864) | |
| 1-388, gnl|oryCun1|scaffold_179357 (210865-210455) | |
| 1-388, gnl|panTro1|chr7 (98020155-98020575) | |
| 1-388, gnl|rn3|chr5 (25175552-25175156) | |
| 508-720, gnl|bosTau2|chr14 (42667690-42667905) | |
| 508-720, gnl|canFam2|chr29 (42371596-42371884) | |
| 508-720, gnl|dasNov1|scaffold_10818 (4-256) | |
| 508-720, gnl|echTel1|scaffold_91132 (6701-6979) | |
| 508-720, gnl|hg17|chr8 (95788442-95788716) | |
| 508-720, gnl|Hg17|chr8 (95788441-95788656) | |
| 508-720, gnl|loxAfr1|scaffold_5410 (67114-67396) | |
| 508-720, gnl|mm7|chr4 (11259473-11259231) | |
| 508-720, gnl|Mm7|chr4 (11259472-11259291) | |
| 508-720, gnl|monDom2|scaffold_3 (70860719-70860433) | |
| 508-720, gnl|oryCun1|scaffold_179357 (210338-210080) | |
| 508-720, gnl|panTro1|chr7 (98020690-98020962) | |
| 508-720, gnl|rn3|chr5 (25175044-25174806) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-388, gnl|bosTau2|chr14 (42667249-42667631) | |
| 1-388, gnl|canFam2|chr29 (42371067-42371486) | |
| 1-388, gnl|dasNov1|scaffold_115786 (4273-4686) | |
| 1-388, gnl|echTel1|scaffold_91132 (6194-6578) | |
| 1-388, gnl|hg17|chr8 (95787907-95788327) | |
| 1-388, gnl|Hg17|chr8 (95787936-95788324) | |
| 1-388, gnl|mm7|chr4 (11259967-11259582) | |
| 1-388, gnl|Mm7|chr4 (11260018-11259566) | |
| 1-388, gnl|monDom2|scaffold_3 (70861284-70860864) | |
| 1-388, gnl|oryCun1|scaffold_179357 (210865-210455) | |
| 1-388, gnl|panTro1|chr7 (98020155-98020575) | |
| 1-388, gnl|rn3|chr5 (25175552-25175156) | |
| 508-720, gnl|bosTau2|chr14 (42667690-42667905) | |
| 508-720, gnl|canFam2|chr29 (42371596-42371884) | |
| 508-720, gnl|dasNov1|scaffold_10818 (4-256) | |
| 508-720, gnl|echTel1|scaffold_91132 (6701-6979) | |
| 508-720, gnl|hg17|chr8 (95788442-95788716) | |
| 508-720, gnl|Hg17|chr8 (95788441-95788656) | |
| 508-720, gnl|loxAfr1|scaffold_5410 (67114-67396) | |
| 508-720, gnl|mm7|chr4 (11259473-11259231) | |
| 508-720, gnl|Mm7|chr4 (11259472-11259291) | |
| 508-720, gnl|monDom2|scaffold_3 (70860719-70860433) | |
| 508-720, gnl|oryCun1|scaffold_179357 (210338-210080) | |
| 508-720, gnl|panTro1|chr7 (98020690-98020962) | |
| 508-720, gnl|rn3|chr5 (25175044-25174806) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| tra (0.246184) | |
| fty (0.17584) | |
| rec (0.17307) | |
| fat (0.147427) | |
| lin (0.145603) | |
| lyg (0.133103) | |
| pgl (0.118483) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tra (0.246184) | |
| fty (0.17584) | |
| rec (0.17307) | |
| fat (0.147427) | |
| lin (0.145603) | |
| lyg (0.133103) | |
| pgl (0.118483) |