Ss1.1-Pig3-SRG8021E02.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAAGGAGACTCTTACGGTGTTACCACAAAAATCTGGAAGATCTGGGCCTTGAAATTATA TTTCCAGACACTAGCGATCGTCTGGTCCTTGTAGGAAAAGTTCCACTCTGTTTTGTAGAA AGAGAAGCCAATGAACTTCGAAGAGGAAGATCTACTGTGACCAAGAGCATTGTGGAGGAA TTTATTCGAGAACAAGTGGAGCTACTCCAGACCACAGGAGGCATCCAAGGTACTTTGCCA CTGACTGTCCAGAAGGTGTTGGCATCCCAAGCCTGCCATGGGGCCATTAAGTTTAATGAC AGTCTGAGCCTAGAGGAGAGCTGTCGCCTTATTGAAGCTCTGTCCTGGTGCCAGCTGCCA TTCCAGTGTGCTCATGGCAGGCCCTCCATGCTACCGTTAGCTGACGTTGACCACCTGGAG CAAGAAAAGCAGATTAAACCCAATCTTGCTAAACTTCGCAGAATGACCCAGGCCTGGCAT CTCTTTGGAAAAGCAGAAGGATCTGATACAAGGCAAAGCCTGCAGGCATCCCTGCCTCCT TGTGAGCCTCCATGAGAATAGATTGTTGTCGTTAAGGAACCAAAGGGATGTTGACTGAAG GCCTCTGAGCAGAGAGCCTGAGCTGCAGGCACCACCCAGGCCCTGTGCACCCATCCCCAT AGCCGGCTGCTCTCATGACCCCTTAAGTTGAGTAACCAGATGGAATCCAAGCCTCAAGAC AGTTGGCATCCATGGACACTGGAGGTTGCTCTACTTTTTGTAGCTTACTTGGGGATAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAAGGAGACTCTTACGGTGTTACCACAAAAATCTGGAAGATCTGGGCCTTGAAATTATA TTTCCAGACACTAGCGATCGTCTGGTCCTTGTAGGAAAAGTTCCACTCTGTTTTGTAGAA AGAGAAGCCAATGAACTTCGAAGAGGAAGATCTACTGTGACCAAGAGCATTGTGGAGGAA TTTATTCGAGAACAAGTGGAGCTACTCCAGACCACAGGAGGCATCCAAGGTACTTTGCCA CTGACTGTCCAGAAGGTGTTGGCATCCCAAGCCTGCCATGGGGCCATTAAGTTTAATGAC AGTCTGAGCCTAGAGGAGAGCTGTCGCCTTATTGAAGCTCTGTCCTGGTGCCAGCTGCCA TTCCAGTGTGCTCATGGCAGGCCCTCCATGCTACCGTTAGCTGACGTTGACCACCTGGAG CAAGAAAAGCAGATTAAACCCAATCTTGCTAAACTTCGCAGAATGACCCAGGCCTGGCAT CTCTTTGGAAAAGCAGAAGGATCTGATACAAGGCAAAGCCTGCAGGCATCCCTGCCTCCT TGTGAGCCTCCATGAGAATAGATTGTTGTCGTTAAGGAACCAAAGGGATGTTGACTGAAG GCCTCTGAGCAGAGAGCCTGAGCTGCAGGCACCACCCAGGCCCTGTGCACCCATCCCCAT AGCCGGCTGCTCTCATGACCCCTTAAGTTGAGTAACCAGATGGAATCCAAGCCTCAAGAC AGTTGGCATCCATGGACACTGGAGGTTGCTCTACTTTTTGTAGCTTACTTGGGGATAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 10-178, gnl|bosTau2|chr10 (56645810-56645642) | |
| 10-178, gnl|canFam2|chr8 (51173221-51173412) | |
| 10-178, gnl|echTel1|scaffold_110660 (402-592) | |
| 10-178, gnl|fr1|chrUn (34830273-34830480) | |
| 10-178, gnl|galGal2|chr5 (34988278-34988461) | |
| 10-178, gnl|hg17|chr14 (74566990-74567185) | |
| 10-178, gnl|Hg17|chr14 (74567166-74566998) | |
| 10-178, gnl|loxAfr1|scaffold_6088 (66179-66370) | |
| 10-178, gnl|mm7|chr12 (83245593-83245782) | |
| 10-178, gnl|Mm7|chr12 (83245768-83245600) | |
| 10-178, gnl|monDom2|scaffold_8 (59458338-59458146) | |
| 10-178, gnl|panTro1|chr15 (74571939-74572134) | |
| 10-178, gnl|rheMac2|chr7 (138141647-138141868) | |
| 10-178, gnl|rn3|chr6 (109296308-109296496) | |
| 430-634, gnl|bosTau2|chr10 (56637884-56637680) | |
| 430-634, gnl|canFam2|chr8 (51162480-51162677) | |
| 430-634, gnl|dasNov1|scaffold_60608 (35519-35309) | |
| 430-634, gnl|echTel1|scaffold_265130 (10799-10669) | |
| 430-634, gnl|galGal2|chr5 (34984937-34985178) | |
| 430-634, gnl|hg17|chr14 (74553385-74553599) | |
| 430-634, gnl|Hg17|chr14 (74553657-74553458) | |
| 430-634, gnl|loxAfr1|scaffold_6088 (57078-57296) | |
| 430-634, gnl|mm7|chr12 (83235349-83235509) | |
| 430-634, gnl|Mm7|chr12 (83235570-83235387) | |
| 430-634, gnl|monDom2|scaffold_8 (59463811-59463601) | |
| 430-634, gnl|oryCun1|scaffold_121179 (6443-6218) | |
| 430-634, gnl|panTro1|chr15 (74556690-74556904) | |
| 430-634, gnl|rheMac2|chr7 (138128106-138128319) | |
| 430-634, gnl|rn3|chr6 (109285239-109285400) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 10-178, gnl|bosTau2|chr10 (56645810-56645642) | |
| 10-178, gnl|canFam2|chr8 (51173221-51173412) | |
| 10-178, gnl|echTel1|scaffold_110660 (402-592) | |
| 10-178, gnl|fr1|chrUn (34830273-34830480) | |
| 10-178, gnl|galGal2|chr5 (34988278-34988461) | |
| 10-178, gnl|hg17|chr14 (74566990-74567185) | |
| 10-178, gnl|Hg17|chr14 (74567166-74566998) | |
| 10-178, gnl|loxAfr1|scaffold_6088 (66179-66370) | |
| 10-178, gnl|mm7|chr12 (83245593-83245782) | |
| 10-178, gnl|Mm7|chr12 (83245768-83245600) | |
| 10-178, gnl|monDom2|scaffold_8 (59458338-59458146) | |
| 10-178, gnl|panTro1|chr15 (74571939-74572134) | |
| 10-178, gnl|rheMac2|chr7 (138141647-138141868) | |
| 10-178, gnl|rn3|chr6 (109296308-109296496) | |
| 430-634, gnl|bosTau2|chr10 (56637884-56637680) | |
| 430-634, gnl|canFam2|chr8 (51162480-51162677) | |
| 430-634, gnl|dasNov1|scaffold_60608 (35519-35309) | |
| 430-634, gnl|echTel1|scaffold_265130 (10799-10669) | |
| 430-634, gnl|galGal2|chr5 (34984937-34985178) | |
| 430-634, gnl|hg17|chr14 (74553385-74553599) | |
| 430-634, gnl|Hg17|chr14 (74553657-74553458) | |
| 430-634, gnl|loxAfr1|scaffold_6088 (57078-57296) | |
| 430-634, gnl|mm7|chr12 (83235349-83235509) | |
| 430-634, gnl|Mm7|chr12 (83235570-83235387) | |
| 430-634, gnl|monDom2|scaffold_8 (59463811-59463601) | |
| 430-634, gnl|oryCun1|scaffold_121179 (6443-6218) | |
| 430-634, gnl|panTro1|chr15 (74556690-74556904) | |
| 430-634, gnl|rheMac2|chr7 (138128106-138128319) | |
| 430-634, gnl|rn3|chr6 (109285239-109285400) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.29274) | |
| eru (0.120048) |