Non-Coding RNA Search

Ss1.1-Pig3-SRG8021M12.3

Sequence:


               
               GCCGTGTGAATGCCTGGCAAGCCAAGGCAAACAACAACAATCAGTGGTTACAGATTGATC
TGCTCAAAATCAAGAAGATAACTGCAATTACAACCCAGGGTTGCAAGTCCCTGTCCTCTG
AAATGTACGTGAAGAGGTACACCATCCAGTATAGTGACCGAGGAGTCGAATGGAAGTCTT
ACAGGGAGAAATCCTCGATGGTAGACAAGATTTTTGAAGGAAATAATAATATCAAAGGAC
ATGTGAAGAACTTTTTCAACCCACCAATCATTTCCAGGTTTATACGCATCATTCCTAAAA
TGTGGAATCAAAGTATTGCACTTCGCCTGGAACTCTTTGGCTGTGATATTTACTAGAACT
GAATATTCAAAAAGACAGGAGGGACTCAAAGATATCAGAGTGGGCAATTTATCTTGTAGC
TATTTTAAATATTAAAATTTTTCCATTATTTCCCTTTTTTCTATTAGAGAATAAAATTTT
CTATGTGAAATCTTTATGATATAGCTCCTTATAACCACTGAGATGATGACTATTGTTTCT
GCATTAATTTGAATATAAATAAGAAAATAGCAAGAAACAAGAGAAGACTTCTTTCACTGA
TTAAAAATGCTATATAAAGTAATATTCATGTATTTAACATTTTTCATTATAGTTCTTTCA
AACCCTATACACATTAATAAAAGAGATATTACTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGTGTGAATGCCTGGCAAGCCAAGGCAAACAACAACAATCAGTGGTTACAGATTGATC
TGCTCAAAATCAAGAAGATAACTGCAATTACAACCCAGGGTTGCAAGTCCCTGTCCTCTG
AAATGTACGTGAAGAGGTACACCATCCAGTATAGTGACCGAGGAGTCGAATGGAAGTCTT
ACAGGGAGAAATCCTCGATGGTAGACAAGATTTTTGAAGGAAATAATAATATCAAAGGAC
ATGTGAAGAACTTTTTCAACCCACCAATCATTTCCAGGTTTATACGCATCATTCCTAAAA
TGTGGAATCAAAGTATTGCACTTCGCCTGGAACTCTTTGGCTGTGATATTTACTAGAACT
GAATATTCAAAAAGACAGGAGGGACTCAAAGATATCAGAGTGGGCAATTTATCTTGTAGC
TATTTTAAATATTAAAATTTTTCCATTATTTCCCTTTTTTCTATTAGAGAATAAAATTTT
CTATGTGAAATCTTTATGATATAGCTCCTTATAACCACTGAGATGATGACTATTGTTTCT
GCATTAATTTGAATATAAATAAGAAAATAGCAAGAAACAAGAGAAGACTTCTTTCACTGA
TTAAAAATGCTATATAAAGTAATATTCATGTATTTAACATTTTTCATTATAGTTCTTTCA
AACCCTATACACATTAATAAAAGAGATATTACTCTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q8C7H9_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8C7H9_MOUSE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               208-693, gnl|bosTau2|chr16 (24930349-24929845)
               

               
               208-693, gnl|Hg17|chr1 (166215357-166214848)
               

               
               208-693, gnl|Mm7|chr1 (164185914-164186442)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               208-693, gnl|bosTau2|chr16 (24930349-24929845)
               

               
               208-693, gnl|Hg17|chr1 (166215357-166214848)
               

               
               208-693, gnl|Mm7|chr1 (164185914-164186442)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               lyg (0.532411)
               

               
               cmu (0.186393)
               

               
               sag (0.182715)
               

               
               fco (0.157208)
               

               
               liv (0.146284)
               

               
               tra (0.123092)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.532411)
               

               
               cmu (0.186393)
               

               
               sag (0.182715)
               

               
               fco (0.157208)
               

               
               liv (0.146284)
               

               
               tra (0.123092)

	208-693, gnl\|bosTau2\|chr16 (24930349-24929845)
	208-693, gnl\|Hg17\|chr1 (166215357-166214848)
	208-693, gnl\|Mm7\|chr1 (164185914-164186442)

	lyg (0.532411)
	cmu (0.186393)
	sag (0.182715)
	fco (0.157208)
	liv (0.146284)
	tra (0.123092)