Non-Coding RNA Search

Ss1.1-Pig3-SRG8021N16.3

Sequence:


               
               ATGTGGTACTAGTGTGTTCTCAGTGAGTGTCATGTTAAGATTACTAAATGCATCAGCCAG
TGGCAGGAATTGGGTGTCGGGATCCAGATTGAGCAGTGCCCTCAGCTGATAGCCTCTTGC
CGCTCAGGTGCTTACCAGCTCTGACACCGACCACGGGAGGTAGATTTTTCTAAAACAGCA
TTAATTTTGTAATGCAATATGATGGATGCAGAGTCTGATACTTTTTCCCTGTGGTGGTCC
TCAGAGACTGCATCCTCTGTGCACTGTGATGTAGATGGTAGCTGTGTTCTTTGTAAGCTT
TAATCTTATGATTGTCAAAATATGATGTGGTTCCAATTTTTTAAAATTAAACGATGAGCT
GAGGCTTTATTTCAGCTGGTTTTCAAGTTAAAATTGTGAAATACTGATTTCTTTCTCTCC
ACCCACACCAAATATTTTAGTCTATTTAAAGTACAAAAAAAAAAAAATAGTTAAGAAAAC
ATGGCTTAAATGTCCTGTGATTTCTGGTCAAATTTTATATATATTTGTGTGTGTCTGTAT
GTGCTTTCACTTTTTACCTTGTTTGCTCTCTACCTGTGTTAACAGTACTTTTCACCATTG
AAAGGTGAACATTTTTCCTAGCATTAAAAAAAAAGCCATTTGAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTGGTACTAGTGTGTTCTCAGTGAGTGTCATGTTAAGATTACTAAATGCATCAGCCAG
TGGCAGGAATTGGGTGTCGGGATCCAGATTGAGCAGTGCCCTCAGCTGATAGCCTCTTGC
CGCTCAGGTGCTTACCAGCTCTGACACCGACCACGGGAGGTAGATTTTTCTAAAACAGCA
TTAATTTTGTAATGCAATATGATGGATGCAGAGTCTGATACTTTTTCCCTGTGGTGGTCC
TCAGAGACTGCATCCTCTGTGCACTGTGATGTAGATGGTAGCTGTGTTCTTTGTAAGCTT
TAATCTTATGATTGTCAAAATATGATGTGGTTCCAATTTTTTAAAATTAAACGATGAGCT
GAGGCTTTATTTCAGCTGGTTTTCAAGTTAAAATTGTGAAATACTGATTTCTTTCTCTCC
ACCCACACCAAATATTTTAGTCTATTTAAAGTACAAAAAAAAAAAAATAGTTAAGAAAAC
ATGGCTTAAATGTCCTGTGATTTCTGGTCAAATTTTATATATATTTGTGTGTGTCTGTAT
GTGCTTTCACTTTTTACCTTGTTTGCTCTCTACCTGTGTTAACAGTACTTTTCACCATTG
AAAGGTGAACATTTTTCCTAGCATTAAAAAAAAAGCCATTTGAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               12-643, gnl|bosTau2|chr24 (37812634-37813281)
               

               
               12-643, gnl|Hg17|chr18 (43614115-43613480)
               

               
               12-643, gnl|Mm7|chr18 (76705486-76706046)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-643, gnl|bosTau2|chr24 (37812634-37813281)
               

               
               12-643, gnl|Hg17|chr18 (43614115-43613480)
               

               
               12-643, gnl|Mm7|chr18 (76705486-76706046)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               aor (0.195274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)

	12-643, gnl\|bosTau2\|chr24 (37812634-37813281)
	12-643, gnl\|Hg17\|chr18 (43614115-43613480)
	12-643, gnl\|Mm7\|chr18 (76705486-76706046)