Ss1.1-Pig3-SRG8022B11.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTCCCAGCATTTTTTTGATACATCAGTGCCACTGATGGACGATGGCGAGGATAATACGCT TTACGATCGGGGTTTCACGGATGACCAGTTGGTGCTGGTGGAGCATAACACGCTGATGGT GGAGGAGAGGGAGCGGGAGATTCGCCAGATTGTCCAGTCTATTTCCGACCTGAACGAGAT ATTCAGGGACCTGGGAGCCATGATTGTAGAGCAGGGCACCGTCCTCGATAGGATCGACTA CAGTGTTGAACAGGCCTGTATGAAGACGGAGGACGGCCTGAAGCAGCTTCACAAGGCAGA GCAGTATCAGAAGAAGAATCGGAAGATGCTTGTGATTTTAATATTACTTGTCATCGTCAT TGTCCTCATCGTTGTCCTCGTCGGCGTGAAGTCTCACTGAGCAGCGTCGGGTCCGTGGGT GCGGCGTGTGGATCTGGGTGCGCGGGGCTCGGCGCCCGCGGCTCCTGCACAGGTGTGGCC GGCCCGGGCGGCCGGAGCGGTTCCAGACTCGGCCCAGGCCAGGGGTGCTGCGGCGGGGAG GGCCGCTGTTCCTCCTTCAGTGGCAAGACTCTCAGGACCTGGGACCTGCTGCGGGATAGA GATGAGTTCTCTCTTTGGTTATAATTGCTTTTCTTTTTTTTTCTTTTAAGAGAGAGAAAA CGAGTGTAACGTTTACAGGCGCTCCTCAAGCTGTTCAATATTATATGTGTACATGCTACT TTTTTAGCAGTCATGTCTGAGCAGCATGTTAAGATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTCCCAGCATTTTTTTGATACATCAGTGCCACTGATGGACGATGGCGAGGATAATACGCT TTACGATCGGGGTTTCACGGATGACCAGTTGGTGCTGGTGGAGCATAACACGCTGATGGT GGAGGAGAGGGAGCGGGAGATTCGCCAGATTGTCCAGTCTATTTCCGACCTGAACGAGAT ATTCAGGGACCTGGGAGCCATGATTGTAGAGCAGGGCACCGTCCTCGATAGGATCGACTA CAGTGTTGAACAGGCCTGTATGAAGACGGAGGACGGCCTGAAGCAGCTTCACAAGGCAGA GCAGTATCAGAAGAAGAATCGGAAGATGCTTGTGATTTTAATATTACTTGTCATCGTCAT TGTCCTCATCGTTGTCCTCGTCGGCGTGAAGTCTCACTGAGCAGCGTCGGGTCCGTGGGT GCGGCGTGTGGATCTGGGTGCGCGGGGCTCGGCGCCCGCGGCTCCTGCACAGGTGTGGCC GGCCCGGGCGGCCGGAGCGGTTCCAGACTCGGCCCAGGCCAGGGGTGCTGCGGCGGGGAG GGCCGCTGTTCCTCCTTCAGTGGCAAGACTCTCAGGACCTGGGACCTGCTGCGGGATAGA GATGAGTTCTCTCTTTGGTTATAATTGCTTTTCTTTTTTTTTCTTTTAAGAGAGAGAAAA CGAGTGTAACGTTTACAGGCGCTCCTCAAGCTGTTCAATATTATATGTGTACATGCTACT TTTTTAGCAGTCATGTCTGAGCAGCATGTTAAGATA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 70-215, gnl|bosTau2|chr13 (38121296-38121151) | |
| 70-215, gnl|canFam2|chr24 (46425255-46425424) | |
| 70-215, gnl|danRer3|chr6 (31453776-31453610) | |
| 70-215, gnl|dasNov1|scaffold_47332 (3725-3891) | |
| 70-215, gnl|echTel1|scaffold_246405 (12285-12117) | |
| 70-215, gnl|fr1|chrUn (176398901-176398753) | |
| 70-215, gnl|galGal2|chr20 (10595462-10595297) | |
| 70-215, gnl|hg17|chr20 (56679605-56679771) | |
| 70-215, gnl|Hg17|chr20 (56679615-56679760) | |
| 70-215, gnl|loxAfr1|scaffold_5716 (18684-18515) | |
| 70-215, gnl|mm7|chr2 (173838313-173838474) | |
| 70-215, gnl|Mm7|chr2 (173838322-173838467) | |
| 70-215, gnl|monDom2|scaffold_1 (173159501-173159676) | |
| 70-215, gnl|oryCun1|scaffold_208180 (31298-31465) | |
| 70-215, gnl|panTro1|chr21 (59677268-59677434) | |
| 70-215, gnl|rheMac2|chr10 (5856435-5856269) | |
| 70-215, gnl|rn3|chr3 (164924048-164924209) | |
| 70-215, gnl|tetNig1|chr11 (2102814-2102963) | |
| 70-215, gnl|xenTro1|scaffold_1886 (6312-6159) | |
| 294-752, gnl|bosTau2|chr13 (38117087-38116613) | |
| 294-752, gnl|Hg17|chr20 (56684647-56685138) | |
| 294-752, gnl|Mm7|chr2 (173841311-173841766) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 70-215, gnl|bosTau2|chr13 (38121296-38121151) | |
| 70-215, gnl|canFam2|chr24 (46425255-46425424) | |
| 70-215, gnl|danRer3|chr6 (31453776-31453610) | |
| 70-215, gnl|dasNov1|scaffold_47332 (3725-3891) | |
| 70-215, gnl|echTel1|scaffold_246405 (12285-12117) | |
| 70-215, gnl|fr1|chrUn (176398901-176398753) | |
| 70-215, gnl|galGal2|chr20 (10595462-10595297) | |
| 70-215, gnl|hg17|chr20 (56679605-56679771) | |
| 70-215, gnl|Hg17|chr20 (56679615-56679760) | |
| 70-215, gnl|loxAfr1|scaffold_5716 (18684-18515) | |
| 70-215, gnl|mm7|chr2 (173838313-173838474) | |
| 70-215, gnl|Mm7|chr2 (173838322-173838467) | |
| 70-215, gnl|monDom2|scaffold_1 (173159501-173159676) | |
| 70-215, gnl|oryCun1|scaffold_208180 (31298-31465) | |
| 70-215, gnl|panTro1|chr21 (59677268-59677434) | |
| 70-215, gnl|rheMac2|chr10 (5856435-5856269) | |
| 70-215, gnl|rn3|chr3 (164924048-164924209) | |
| 70-215, gnl|tetNig1|chr11 (2102814-2102963) | |
| 70-215, gnl|xenTro1|scaffold_1886 (6312-6159) | |
| 294-752, gnl|bosTau2|chr13 (38117087-38116613) | |
| 294-752, gnl|Hg17|chr20 (56684647-56685138) | |
| 294-752, gnl|Mm7|chr2 (173841311-173841766) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.16592) | |
| cst (0.140036) | |
| ste (0.135208) |