Non-Coding RNA Search

Ss1.1-Pig3-SRG8022C15.5

Sequence:


               
               CAGCCTTGCTCTGGGAGCCTATTTCACACTGAACACGCCGCATGTCCCACAAAAATACAG
TTCCATCGTCGCTGGTAAAAAGCAGAAATGGCTTCAATGGATAGAGAGTGGACGGCTGCC
CGCTAATATTGCAGGATAGGCTTTTGAGGTATGCTGTGTCTAACATATCAACTGCTCTGT
AGGGAAAATTAAATGACTTTGAAAATTAGGTTTTACGTCTCCGGGTGTGTATTCAAATTG
GAGAAGTTTCTTGCTCTTGGAAATAACAAGTACTCCTCTCCGTAACCAGCCATCATGAGA
AATTAAAATGGCTTATTTTCTGAACAGAAAATAATTCAAAATGGAGAGGTAGACGTTTTT
TAGAGTAATTCATAATAATGGAAGTGAATAGATAAATATCAGTTCTCTTCCCCGACATTA
TTCTTATAAATACATTTACTATATGAAAATTTTAAATTCGCATAGCTACATCATTATTTC
CTAAGGTGATGATGCCGCTGATAGTCTTCCTCCCATGGTCAGTGTGTGTAAAAATACCGG
TAGTCTTGACTGACTTTCCAACTTGCAAGTGCTGTATCTATTATGTTTTGAAAATGTGTA
GTGGTTGTTGCCTTCCAAGAGTATTCTAGATAAAATTATAGCACCAATACAAGAAAGTGT
TTTTTATACTAAGACATCATGTTAATAACTGTTAATTATTTTCATTTACCACAATCATTT
TACAAAAGAACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCCTTGCTCTGGGAGCCTATTTCACACTGAACACGCCGCATGTCCCACAAAAATACAG
TTCCATCGTCGCTGGTAAAAAGCAGAAATGGCTTCAATGGATAGAGAGTGGACGGCTGCC
CGCTAATATTGCAGGATAGGCTTTTGAGGTATGCTGTGTCTAACATATCAACTGCTCTGT
AGGGAAAATTAAATGACTTTGAAAATTAGGTTTTACGTCTCCGGGTGTGTATTCAAATTG
GAGAAGTTTCTTGCTCTTGGAAATAACAAGTACTCCTCTCCGTAACCAGCCATCATGAGA
AATTAAAATGGCTTATTTTCTGAACAGAAAATAATTCAAAATGGAGAGGTAGACGTTTTT
TAGAGTAATTCATAATAATGGAAGTGAATAGATAAATATCAGTTCTCTTCCCCGACATTA
TTCTTATAAATACATTTACTATATGAAAATTTTAAATTCGCATAGCTACATCATTATTTC
CTAAGGTGATGATGCCGCTGATAGTCTTCCTCCCATGGTCAGTGTGTGTAAAAATACCGG
TAGTCTTGACTGACTTTCCAACTTGCAAGTGCTGTATCTATTATGTTTTGAAAATGTGTA
GTGGTTGTTGCCTTCCAAGAGTATTCTAGATAAAATTATAGCACCAATACAAGAAAGTGT
TTTTTATACTAAGACATCATGTTAATAACTGTTAATTATTTTCATTTACCACAATCATTT
TACAAAAGAACT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-730, gnl|bosTau2|chr20 (5205742-5205004)
               

               
               1-730, gnl|Hg17|chr5 (72147824-72147092)
               

               
               1-730, gnl|Mm7|chr13 (95996522-95997304)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-730, gnl|bosTau2|chr20 (5205742-5205004)
               

               
               1-730, gnl|Hg17|chr5 (72147824-72147092)
               

               
               1-730, gnl|Mm7|chr13 (95996522-95997304)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	1-730, gnl\|bosTau2\|chr20 (5205742-5205004)
	1-730, gnl\|Hg17\|chr5 (72147824-72147092)
	1-730, gnl\|Mm7\|chr13 (95996522-95997304)