Non-Coding RNA Search

Ss1.1-Pig3-SRG8022H16.3

Sequence:


               
               GAGACATAGGAACCCGCAAAGAGGGTGCTTGGGGAAACAGATGGGGGCGGACGGAGCAGC
AGCCTTAGGGAGAGAGGCGGTCTGCCAAGGTCTTTGCCAAGAACGTGATGCTTGAGTTGG
TCTCTAAGGATGAGCAGGATGCAGACAGGGAGTGAGAGGAAAGGAAGCTCATTTCAGACA
GTGGGAACAGCATGTGCAAAGGCAGGGAAGTGTAAGTGCTCGGCCCCCTGGGAGCCCTGT
AAACAATGACGGGGCAGCTAGAACAGAACGTGAGAATTATTAGAGAAGGTCAGAATTAGG
GCTGCACCAGGAAGGACCATGCATGACCTTGGAAAGCCCTTCATCTTGCCATTCAGAGGA
TGTAATCAACTTAGCTTAAGTCCGTAAGTCGGGCTGGTCGAGGTGGCTAGCAAGTCAAGC
TCCGGACAGATGTGTTCACAGCATGATGCGTGCAGCCATCAGTGACCTTACAACGCTATG
CACCAACTGTGTTAACTCACAGATGCTTCCTGGGCCGCCATGGGTACTGTGGTGTGTGTG
CATGAAGGGATACAGTCCTGAGCTCGGGCTGCTTGCTTGTTGAACAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGACATAGGAACCCGCAAAGAGGGTGCTTGGGGAAACAGATGGGGGCGGACGGAGCAGC
AGCCTTAGGGAGAGAGGCGGTCTGCCAAGGTCTTTGCCAAGAACGTGATGCTTGAGTTGG
TCTCTAAGGATGAGCAGGATGCAGACAGGGAGTGAGAGGAAAGGAAGCTCATTTCAGACA
GTGGGAACAGCATGTGCAAAGGCAGGGAAGTGTAAGTGCTCGGCCCCCTGGGAGCCCTGT
AAACAATGACGGGGCAGCTAGAACAGAACGTGAGAATTATTAGAGAAGGTCAGAATTAGG
GCTGCACCAGGAAGGACCATGCATGACCTTGGAAAGCCCTTCATCTTGCCATTCAGAGGA
TGTAATCAACTTAGCTTAAGTCCGTAAGTCGGGCTGGTCGAGGTGGCTAGCAAGTCAAGC
TCCGGACAGATGTGTTCACAGCATGATGCGTGCAGCCATCAGTGACCTTACAACGCTATG
CACCAACTGTGTTAACTCACAGATGCTTCCTGGGCCGCCATGGGTACTGTGGTGTGTGTG
CATGAAGGGATACAGTCCTGAGCTCGGGCTGCTTGCTTGTTGAACAAG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               60-587, gnl|bosTau2|chr3 (69057700-69058203)
               

               
               60-587, gnl|Hg17|chr1 (48179736-48180256)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               60-587, gnl|bosTau2|chr3 (69057700-69058203)
               

               
               60-587, gnl|Hg17|chr1 (48179736-48180256)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               duo (0.172801)
               

               
               cje (0.165235)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               duo (0.172801)
               

               
               cje (0.165235)

	60-587, gnl\|bosTau2\|chr3 (69057700-69058203)
	60-587, gnl\|Hg17\|chr1 (48179736-48180256)