Non-Coding RNA Search

Ss1.1-Pig3-SRG8022J17.5

Sequence:


               
               AAGATGTTCCAATTGTTCACAACGGTTTCAAAACACTTTGGAAGTTCAAAGTTTTAGTGG
AAGATTATGTTGTAGTATTACCTCTATTAATTTTAACTGAAGCTAATATGATTCCACTCA
GCCTTAGTTCTAGGTAAAATCCTTGTTAGTTATACTAAACTCCTAAAGGCAAATGGCAGA
GCGCTAATGCAGCTTGAGCCTGTGTTACTACTCCTGGGCTCATGGGTGAGCCAGAGAGCC
ACTTTTTCAATAATGCATATTTATTACAGCTTTAAGAGTAGCCATTCCATATACTGAGTA
GTTGCTCTTTAGCTTCATTAAATAAGACACAACAAGGGGAAAGACTTTTATCTCACAAAA
TGGCTTTCAAGTTCAAGTTGAACTACAGGATAATTATACTGTGGCACAGGGGCAGCTTTG
GGCACTTCTTGCTACAACAGCACAATGCTTCAACTTCTGACAAGACTCAGCATAGCCTTG
AGTACCAACCGAAGATGTTGACTTTCCTGCAACCAGCGTTGTCTTTCCAGAATAACAAAG
GTACAAATGAGGTACAACCCATCACAGCTTCCTTCTCATATTCATCTTGTAAGTAAGAGG
ATTCTCTTTTAAAAACTACAATTCTGCAACTTTTAAAAGATTGTTAACGTCTTCTATCAT
GTTAAATTAGCAACATAAAACATTACACTTAAACTATAAAGTTCTACTCTGGTTCTCTAG
GATTTATATACATGTTTTTACTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGATGTTCCAATTGTTCACAACGGTTTCAAAACACTTTGGAAGTTCAAAGTTTTAGTGG
AAGATTATGTTGTAGTATTACCTCTATTAATTTTAACTGAAGCTAATATGATTCCACTCA
GCCTTAGTTCTAGGTAAAATCCTTGTTAGTTATACTAAACTCCTAAAGGCAAATGGCAGA
GCGCTAATGCAGCTTGAGCCTGTGTTACTACTCCTGGGCTCATGGGTGAGCCAGAGAGCC
ACTTTTTCAATAATGCATATTTATTACAGCTTTAAGAGTAGCCATTCCATATACTGAGTA
GTTGCTCTTTAGCTTCATTAAATAAGACACAACAAGGGGAAAGACTTTTATCTCACAAAA
TGGCTTTCAAGTTCAAGTTGAACTACAGGATAATTATACTGTGGCACAGGGGCAGCTTTG
GGCACTTCTTGCTACAACAGCACAATGCTTCAACTTCTGACAAGACTCAGCATAGCCTTG
AGTACCAACCGAAGATGTTGACTTTCCTGCAACCAGCGTTGTCTTTCCAGAATAACAAAG
GTACAAATGAGGTACAACCCATCACAGCTTCCTTCTCATATTCATCTTGTAAGTAAGAGG
ATTCTCTTTTAAAAACTACAATTCTGCAACTTTTAAAAGATTGTTAACGTCTTCTATCAT
GTTAAATTAGCAACATAAAACATTACACTTAAACTATAAAGTTCTACTCTGGTTCTCTAG
GATTTATATACATGTTTTTACTTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-744, gnl|bosTau2|chr9 (40664196-40664915)
               

               
               5-744, gnl|Hg17|chr6 (134351339-134350573)
               

               
               5-744, gnl|Mm7|chr10 (22461297-22461919)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-744, gnl|bosTau2|chr9 (40664196-40664915)
               

               
               5-744, gnl|Hg17|chr6 (134351339-134350573)
               

               
               5-744, gnl|Mm7|chr10 (22461297-22461919)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               hea (0.204499)
               

               
               liv (0.146284)
               

               
               spl (0.143184)
               

               
               kid (0.129735)
               

               
               ret (0.128733)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               liv (0.146284)
               

               
               spl (0.143184)
               

               
               kid (0.129735)
               

               
               ret (0.128733)

	5-744, gnl\|bosTau2\|chr9 (40664196-40664915)
	5-744, gnl\|Hg17\|chr6 (134351339-134350573)
	5-744, gnl\|Mm7\|chr10 (22461297-22461919)

	hea (0.204499)
	liv (0.146284)
	spl (0.143184)
	kid (0.129735)
	ret (0.128733)