Non-Coding RNA Search

Ss1.1-Pig3-SRG8022N23.3

Sequence:


               
               CATTTGGGGTAGTGACTCCTTTTTTGTTAGGACATTTGAAACTAGTAAGCAGCCATTGTT
TCTAAAAAAAAAAAAGAAAAAAAGAAAACTCAGCCTTCGTGTTGATTCATGTTTCTTTCA
CTTCATTTTGAAATAGCTAAAAGTCATTAAAACTGTAAATATTTTGTTGCTTGGATAAGC
ATCTCCTGAGAACTTTGTATCTATGGTATATAATCATAGAATTTTATATTTTCATATAAA
GCTAATTTTTTTCTAGTTTCAACTCTGTCATAGTTTTTTTTTTTTCTTCCTTTGTGGTGG
ATATGTGAATTCAACTTTCTGTGTATTGAAGTAGCAAGAACCATCTTTGCATTCCAAAAG
AATCCAACATGTGTTATTTCTTTGAGGCAGTGATTGTGAAAGTTGGGATTTCTTTTTTAG
TTTCATTGACCATTTGTGCAATAGGAATTAGACATAATTAGTCACTGAATACATTCATTG
CATTGACCCATTTGGAAAAAGTGTTGTTTTTTTAATTTGTTCAGGGGGAGGGGTTTTGTA
ACCTGAGATTTTTCCCTTTTTTCTTCTGTTTAAAACTATATCAAATCATTCTATTATAGT
GTTATTTAATATGTAAATTGTATTGCTATACATAAAATAAAGTATGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTTGGGGTAGTGACTCCTTTTTTGTTAGGACATTTGAAACTAGTAAGCAGCCATTGTT
TCTAAAAAAAAAAAAGAAAAAAAGAAAACTCAGCCTTCGTGTTGATTCATGTTTCTTTCA
CTTCATTTTGAAATAGCTAAAAGTCATTAAAACTGTAAATATTTTGTTGCTTGGATAAGC
ATCTCCTGAGAACTTTGTATCTATGGTATATAATCATAGAATTTTATATTTTCATATAAA
GCTAATTTTTTTCTAGTTTCAACTCTGTCATAGTTTTTTTTTTTTCTTCCTTTGTGGTGG
ATATGTGAATTCAACTTTCTGTGTATTGAAGTAGCAAGAACCATCTTTGCATTCCAAAAG
AATCCAACATGTGTTATTTCTTTGAGGCAGTGATTGTGAAAGTTGGGATTTCTTTTTTAG
TTTCATTGACCATTTGTGCAATAGGAATTAGACATAATTAGTCACTGAATACATTCATTG
CATTGACCCATTTGGAAAAAGTGTTGTTTTTTTAATTTGTTCAGGGGGAGGGGTTTTGTA
ACCTGAGATTTTTCCCTTTTTTCTTCTGTTTAAAACTATATCAAATCATTCTATTATAGT
GTTATTTAATATGTAAATTGTATTGCTATACATAAAATAAAGTATGGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-648, gnl|bosTau2|chr22 (30102646-30103300)
               

               
               1-648, gnl|Hg17|chr3 (62257685-62258314)
               

               
               1-648, gnl|Mm7|chr14 (10057255-10057891)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-648, gnl|bosTau2|chr22 (30102646-30103300)
               

               
               1-648, gnl|Hg17|chr3 (62257685-62258314)
               

               
               1-648, gnl|Mm7|chr14 (10057255-10057891)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nco (0.161734)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)

	1-648, gnl\|bosTau2\|chr22 (30102646-30103300)
	1-648, gnl\|Hg17\|chr3 (62257685-62258314)
	1-648, gnl\|Mm7\|chr14 (10057255-10057891)