Ss1.1-Pig3-SRG8022O09.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGCCTCAGTAACTTGGATTTGCAGCTGGAACTCGGAGACATCACCCTGAAAGGATACAA CCTGTCCAAGTCAGCCCTGCTGAGGCCCTTTCTGATGAACCCACGTTATGCAGAGTTGGC AGTAAATCAGGCTCCTGTGACAGGGCAACGAAATGACAGTATGGAGGCCCCATTGGGAAA ACAGGTTCACAGAAGCATCTACCCGAGCAGCTTATGAACACCTGAAAGGTCCCAGGGGTC CTTGCCTCTTCCAGCAGTGACCATGAGGGTGAACGGCCATTCCCAGAGTCAGACGCCACT GGACTTATAAACCAAAGCCAGACTCAGGTCCCAAACTATGACCCAAACAATGGGAGGCAG GAGTGTGTCCAAAGAAAAGTTCTCATCTCTGATTGTCAGCTTGGAAAAGAAGGAGACACA AGAAAAGATAATCACAGGGAAAGAACAAGAGAAAAACAGACTGGGGGAAAATGCTAACAG TCACTTAGGTGGTGATGAAGTATTACCTGGAAGAAAACTGCAGTATTACACAGACAGTTA CCTGGGCTTTTTGCCATGGGAGAAGAAGAAGTATTTCCAGGATCTTCTGGATGAAGAAGA GTCACTGAAGACACAACTGGCATACTTCACTGACAGCAAACACACTGGGAGGCACCTAAA AGATACGTTTGCAGATTCCCTCCGTTATGTGAATAAAATTCTGAACAGCAAGTTTGGATT CACGTCTCGCAAAGTCCCCGCACACATGCCTCACATGATCGACCGGATCGTTATGCAAGA ACTGCAAGATATGTTCCCTGAAGAATTTGACAAGACGTCGTTTCACAAAGTGCGCCATTC CGAGGACATGCAGTTTGCCTTCTCTTACTTTTATTATCTCATGAGTGCAGTTCAGCCCTT GAATGTATCTCAAGTCTTTGATGAAGTTGACACAGATCAATCTGGTGTCTTATCTGATAG AGAAATACGAACGCTGGCTACCAGAATTCACGACTTGCCTTTAAGTTTGCAGGATTTAAC AGGTCTGGAGCACATGTTGATAAATTGTTCGAAAATGCTTCCCGCTAATATCACTCAGCT AAACAACATCCCTCCAACTCAGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGCCTCAGTAACTTGGATTTGCAGCTGGAACTCGGAGACATCACCCTGAAAGGATACAA CCTGTCCAAGTCAGCCCTGCTGAGGCCCTTTCTGATGAACCCACGTTATGCAGAGTTGGC AGTAAATCAGGCTCCTGTGACAGGGCAACGAAATGACAGTATGGAGGCCCCATTGGGAAA ACAGGTTCACAGAAGCATCTACCCGAGCAGCTTATGAACACCTGAAAGGTCCCAGGGGTC CTTGCCTCTTCCAGCAGTGACCATGAGGGTGAACGGCCATTCCCAGAGTCAGACGCCACT GGACTTATAAACCAAAGCCAGACTCAGGTCCCAAACTATGACCCAAACAATGGGAGGCAG GAGTGTGTCCAAAGAAAAGTTCTCATCTCTGATTGTCAGCTTGGAAAAGAAGGAGACACA AGAAAAGATAATCACAGGGAAAGAACAAGAGAAAAACAGACTGGGGGAAAATGCTAACAG TCACTTAGGTGGTGATGAAGTATTACCTGGAAGAAAACTGCAGTATTACACAGACAGTTA CCTGGGCTTTTTGCCATGGGAGAAGAAGAAGTATTTCCAGGATCTTCTGGATGAAGAAGA GTCACTGAAGACACAACTGGCATACTTCACTGACAGCAAACACACTGGGAGGCACCTAAA AGATACGTTTGCAGATTCCCTCCGTTATGTGAATAAAATTCTGAACAGCAAGTTTGGATT CACGTCTCGCAAAGTCCCCGCACACATGCCTCACATGATCGACCGGATCGTTATGCAAGA ACTGCAAGATATGTTCCCTGAAGAATTTGACAAGACGTCGTTTCACAAAGTGCGCCATTC CGAGGACATGCAGTTTGCCTTCTCTTACTTTTATTATCTCATGAGTGCAGTTCAGCCCTT GAATGTATCTCAAGTCTTTGATGAAGTTGACACAGATCAATCTGGTGTCTTATCTGATAG AGAAATACGAACGCTGGCTACCAGAATTCACGACTTGCCTTTAAGTTTGCAGGATTTAAC AGGTCTGGAGCACATGTTGATAAATTGTTCGAAAATGCTTCCCGCTAATATCACTCAGCT AAACAACATCCCTCCAACTCAGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-593, gnl|bosTau2|chr5 (39848698-39849266) | |
| 1-593, gnl|Hg17|chr12 (100661036-100660447) | |
| 1-593, gnl|Mm7|chr10 (87991423-87991949) | |
| 788-1013, gnl|bosTau2|chr5 (39851742-39851967) | |
| 788-1013, gnl|canFam2|chr15 (43681202-43681431) | |
| 788-1013, gnl|danRer3|chr4 (19086029-19085806) | |
| 788-1013, gnl|dasNov1|scaffold_14185 (7431-7660) | |
| 788-1013, gnl|echTel1|scaffold_313024 (42857-43086) | |
| 788-1013, gnl|fr1|chrUn (212027619-212027843) | |
| 788-1013, gnl|galGal2|chr1 (52247900-52247671) | |
| 788-1013, gnl|hg17|chr12 (100657366-100657595) | |
| 788-1013, gnl|Hg17|chr12 (100657597-100657372) | |
| 788-1013, gnl|loxAfr1|scaffold_1180 (30973-30744) | |
| 788-1013, gnl|mm7|chr10 (87994440-87994211) | |
| 788-1013, gnl|Mm7|chr10 (87994207-87994432) | |
| 788-1013, gnl|monDom2|scaffold_34 (11574817-11574592) | |
| 788-1013, gnl|oryCun1|scaffold_144167 (6569-6340) | |
| 788-1013, gnl|panTro1|chr10 (103119123-103119352) | |
| 788-1013, gnl|rheMac2|chr11 (102956408-102956637) | |
| 788-1013, gnl|rn3|chr7 (25157694-25157465) | |
| 788-1013, gnl|tetNig1|chr19 (1618939-1619163) | |
| 788-1013, gnl|xenTro1|scaffold_230 (259158-258927) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-593, gnl|bosTau2|chr5 (39848698-39849266) | |
| 1-593, gnl|Hg17|chr12 (100661036-100660447) | |
| 1-593, gnl|Mm7|chr10 (87991423-87991949) | |
| 788-1013, gnl|bosTau2|chr5 (39851742-39851967) | |
| 788-1013, gnl|canFam2|chr15 (43681202-43681431) | |
| 788-1013, gnl|danRer3|chr4 (19086029-19085806) | |
| 788-1013, gnl|dasNov1|scaffold_14185 (7431-7660) | |
| 788-1013, gnl|echTel1|scaffold_313024 (42857-43086) | |
| 788-1013, gnl|fr1|chrUn (212027619-212027843) | |
| 788-1013, gnl|galGal2|chr1 (52247900-52247671) | |
| 788-1013, gnl|hg17|chr12 (100657366-100657595) | |
| 788-1013, gnl|Hg17|chr12 (100657597-100657372) | |
| 788-1013, gnl|loxAfr1|scaffold_1180 (30973-30744) | |
| 788-1013, gnl|mm7|chr10 (87994440-87994211) | |
| 788-1013, gnl|Mm7|chr10 (87994207-87994432) | |
| 788-1013, gnl|monDom2|scaffold_34 (11574817-11574592) | |
| 788-1013, gnl|oryCun1|scaffold_144167 (6569-6340) | |
| 788-1013, gnl|panTro1|chr10 (103119123-103119352) | |
| 788-1013, gnl|rheMac2|chr11 (102956408-102956637) | |
| 788-1013, gnl|rn3|chr7 (25157694-25157465) | |
| 788-1013, gnl|tetNig1|chr19 (1618939-1619163) | |
| 788-1013, gnl|xenTro1|scaffold_230 (259158-258927) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) | |
| nca (0.136874) | |
| ecc (0.115035) |