Ss1.1-Pig3-SRG8023I05.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGTGAAATTAGCTGAAAATGCTTCGTTTGATTTCTTGCCCAAGTTCCAGTGCGTGTTCC GGGTGCTGCCCCAGTGCCTGCGCCCAGAGACACCCCTGCCTGGTGTGCTACTGACTGTTG AGCTCCTGTCCCTCCTGGCGGACCATGAGAAGCTCGCCCCTCATCTCTGTTCCCACTCAG GCTGCCTCCTCCTCCTCCTGTACATGTACATCACGTCAAGGCCTGACAAAGCAGCCTCGG AGACACAGTGGCTTCAGCTGGAACAAGAGGCCGTGTGGCTCCTGGCTAAGCTTGGTGTCC AGAGCCCCTCTTCCCCAGTTACCGGCTCCAGCTGTCAGTGCAACGTGGAGGTGGTCAGAG CACTCACCGTGATGCTGCACAGACAGTGGCTGACGGTGCAGAGGGCGGGGGCGCTCCCGA GGACTGACCAGCAGAAGCGGACAGTGCGGTGTCTGCGGGACACAGTGCTGCTGCTGCACA GCCTGTCCCAGAAGGACAAGCTCTTCACTGTGCACTGCGTGGAGGTCCTGCATCAGTACG ACCAGGTGATGCCAGGGGTCAGCTTGCTGATTCGAGGGCTTCCTGACGTGACAGACTGTG AAGAGGCAGCCCTGGATGACCTCTGCGCCACAGAGCCCGATGTGGACGACCCTGAGATGG ACTGTGGCTGAGGCCGGGTGAACATCGAGCCACATGGTGGCACCAGCGCCACTCATTTCC TTACCTCATCCACTGATTAAAAGCAGTGACTGGCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGTGAAATTAGCTGAAAATGCTTCGTTTGATTTCTTGCCCAAGTTCCAGTGCGTGTTCC GGGTGCTGCCCCAGTGCCTGCGCCCAGAGACACCCCTGCCTGGTGTGCTACTGACTGTTG AGCTCCTGTCCCTCCTGGCGGACCATGAGAAGCTCGCCCCTCATCTCTGTTCCCACTCAG GCTGCCTCCTCCTCCTCCTGTACATGTACATCACGTCAAGGCCTGACAAAGCAGCCTCGG AGACACAGTGGCTTCAGCTGGAACAAGAGGCCGTGTGGCTCCTGGCTAAGCTTGGTGTCC AGAGCCCCTCTTCCCCAGTTACCGGCTCCAGCTGTCAGTGCAACGTGGAGGTGGTCAGAG CACTCACCGTGATGCTGCACAGACAGTGGCTGACGGTGCAGAGGGCGGGGGCGCTCCCGA GGACTGACCAGCAGAAGCGGACAGTGCGGTGTCTGCGGGACACAGTGCTGCTGCTGCACA GCCTGTCCCAGAAGGACAAGCTCTTCACTGTGCACTGCGTGGAGGTCCTGCATCAGTACG ACCAGGTGATGCCAGGGGTCAGCTTGCTGATTCGAGGGCTTCCTGACGTGACAGACTGTG AAGAGGCAGCCCTGGATGACCTCTGCGCCACAGAGCCCGATGTGGACGACCCTGAGATGG ACTGTGGCTGAGGCCGGGTGAACATCGAGCCACATGGTGGCACCAGCGCCACTCATTTCC TTACCTCATCCACTGATTAAAAGCAGTGACTGGCTG |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 41-181, gnl|bosTau2|chr22 (39041830-39041970) | |
| 41-181, gnl|canFam2|chr20 (43627839-43627692) | |
| 41-181, gnl|danRer3|chr6 (30666209-30666348) | |
| 41-181, gnl|dasNov1|scaffold_28483 (2711-2564) | |
| 41-181, gnl|echTel1|scaffold_309602 (1446-1299) | |
| 41-181, gnl|galGal2|chr12 (3349872-3349747) | |
| 41-181, gnl|hg17|chr3 (48480147-48480294) | |
| 41-181, gnl|Hg17|chr3 (48480145-48480285) | |
| 41-181, gnl|loxAfr1|scaffold_31551 (7267-7120) | |
| 41-181, gnl|mm7|chr9 (108771934-108771787) | |
| 41-181, gnl|Mm7|chr9 (108771934-108771794) | |
| 41-181, gnl|monDom2|scaffold_5 (84140872-84140719) | |
| 41-181, gnl|oryCun1|scaffold_176842 (27293-27446) | |
| 41-181, gnl|panTro1|chr2 (49964977-49965124) | |
| 41-181, gnl|rheMac2|chr2 (88015344-88015197) | |
| 41-181, gnl|rn3|chr8 (114094547-114094400) | |
| 41-181, gnl|xenTro1|scaffold_425 (552763-552910) | |
| 349-645, gnl|bosTau2|chr22 (39043320-39043615) | |
| 349-645, gnl|Hg17|chr3 (48481232-48481524) | |
| 349-645, gnl|Mm7|chr9 (108770777-108770490) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 41-181, gnl|bosTau2|chr22 (39041830-39041970) | |
| 41-181, gnl|canFam2|chr20 (43627839-43627692) | |
| 41-181, gnl|danRer3|chr6 (30666209-30666348) | |
| 41-181, gnl|dasNov1|scaffold_28483 (2711-2564) | |
| 41-181, gnl|echTel1|scaffold_309602 (1446-1299) | |
| 41-181, gnl|galGal2|chr12 (3349872-3349747) | |
| 41-181, gnl|hg17|chr3 (48480147-48480294) | |
| 41-181, gnl|Hg17|chr3 (48480145-48480285) | |
| 41-181, gnl|loxAfr1|scaffold_31551 (7267-7120) | |
| 41-181, gnl|mm7|chr9 (108771934-108771787) | |
| 41-181, gnl|Mm7|chr9 (108771934-108771794) | |
| 41-181, gnl|monDom2|scaffold_5 (84140872-84140719) | |
| 41-181, gnl|oryCun1|scaffold_176842 (27293-27446) | |
| 41-181, gnl|panTro1|chr2 (49964977-49965124) | |
| 41-181, gnl|rheMac2|chr2 (88015344-88015197) | |
| 41-181, gnl|rn3|chr8 (114094547-114094400) | |
| 41-181, gnl|xenTro1|scaffold_425 (552763-552910) | |
| 349-645, gnl|bosTau2|chr22 (39043320-39043615) | |
| 349-645, gnl|Hg17|chr3 (48481232-48481524) | |
| 349-645, gnl|Mm7|chr9 (108770777-108770490) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fbs (0.175346) | |
| mcp (0.170648) | |
| lnt (0.142308) | |
| jej (0.0989218) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fbs (0.175346) | |
| mcp (0.170648) | |
| lnt (0.142308) | |
| jej (0.0989218) |