Non-Coding RNA Search

Ss1.1-Pig3-SRG8023L17.3

Sequence:


               
               TTCAAAGGATGTCTTCATTTCTTTTTTTTTTTTTAATTTTTCAACTTTTCATGAAGGTAT
AGTTAGTTTATAATGTTGTGCCGGTTTCTGCTGTACAACAGAGTGACCCAGTCATACAGG
TATATCCATTCCCGCTCTTGTATCATCTTCCGTCATGGTCTATCCCAAGAGTCTGGATAT
AGTTCTCTGTGATGCACAGTAGGACCCCACTGCTTATTCATTCTGAAGGTAATAGTTTGC
GTCTGCGAACCTCAAACTCCCCGTCCATCTCTCTCCCTCCCCCTCCCCGTTGGCAACCAC
AGGTCTGAGAGTCTATTTCTATTTTATAGATGTGTTCATTTGTGCCATCTTTTAGATTCC
ACCCATAAATGATATCATGTGATATTTCTTTTTCTGACTTACTTCACTTAGCATGATAAT
CTCTAGTTGCAGCCATGTTGCTACAAATGGCATTATTTCACTTTTTATGGCTGGGTAGTA
TTCCATTGTATATATGTACTGATTTCTGTAATTTTCATATGGAAAATTTTGAATCGGTTC
TGTATATAACACTATGAAACACTTAACTCTTTTGTTTTAATTTTTAGGTTGCTGAAGCAC
ACGTGCCTAATTTCATTTTTGATGAGTTCAGAACAGTCCTGTAACTTTTTCTGCTTCTTC
ACTGAAAGGATTATCCTTAAATCTTCCACCATCGCTAAAATGAACTTAGAAATGAAGCTC
AGCTGCTCATAGAACTGCACTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCAAAGGATGTCTTCATTTCTTTTTTTTTTTTTAATTTTTCAACTTTTCATGAAGGTAT
AGTTAGTTTATAATGTTGTGCCGGTTTCTGCTGTACAACAGAGTGACCCAGTCATACAGG
TATATCCATTCCCGCTCTTGTATCATCTTCCGTCATGGTCTATCCCAAGAGTCTGGATAT
AGTTCTCTGTGATGCACAGTAGGACCCCACTGCTTATTCATTCTGAAGGTAATAGTTTGC
GTCTGCGAACCTCAAACTCCCCGTCCATCTCTCTCCCTCCCCCTCCCCGTTGGCAACCAC
AGGTCTGAGAGTCTATTTCTATTTTATAGATGTGTTCATTTGTGCCATCTTTTAGATTCC
ACCCATAAATGATATCATGTGATATTTCTTTTTCTGACTTACTTCACTTAGCATGATAAT
CTCTAGTTGCAGCCATGTTGCTACAAATGGCATTATTTCACTTTTTATGGCTGGGTAGTA
TTCCATTGTATATATGTACTGATTTCTGTAATTTTCATATGGAAAATTTTGAATCGGTTC
TGTATATAACACTATGAAACACTTAACTCTTTTGTTTTAATTTTTAGGTTGCTGAAGCAC
ACGTGCCTAATTTCATTTTTGATGAGTTCAGAACAGTCCTGTAACTTTTTCTGCTTCTTC
ACTGAAAGGATTATCCTTAAATCTTCCACCATCGCTAAAATGAACTTAGAAATGAAGCTC
AGCTGCTCATAGAACTGCACTTTT

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-431, gnl|bosTau2|chr1 (83072693-83072252)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-431, gnl|bosTau2|chr1 (83072693-83072252)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lin (0.145603)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)
               

               
               spl (0.143184)