Ss1.1-Pig3-SRG8023M17.3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAGCCCCCTGGGAGCCCCCGGCATCCCGCCACCATGTGCGAGCTGTACAGCAAGCAAGA CACCCTGGCGTTGAGGAGGAAGCACATCGGGCCCTCTTGCAAAGTCTTCTTTGCTGCGGA TCCCATCAAAATAGTTCGAGCCCAGCGGCAGTACATGTTTGATGAGAAAGGCGACCGGTA CTTGGACTGCATCAACAATGTTGCCCACGTGGGACACTGCCACCCAGAAGTGGTCCAAGC TGCCCAGAAACAGATGGAACTGCTAAATACAAATTCTCGCTTCCTCCACGACAACATTGT TGAGTATGCCAAGCGCCTGTCATCAACCCTGCCGGACAAACTCTCCGTTTGCTATTTTAC AAACTCAGGATCTGAAGCCAATGACTTAGCCTTACGTCTGGCTCGGCAGTTCAGAGGCCA TCAAGACGTGATCACTCTTGACCATGCTTACCATGGTCACCTAACATCTTTAATTGAGAT CAGTCCATATAAATTTCAGCAGGGCAAAGATGTCAAGAAAGAATTTGTGCATGTGGCCCC ATCTCCAGATACTTACAGAGGTAAATACAGAGAAGACCATGCAGACCCGGCCGGTGCTTA TGCCGATGAAGTGAAGAAAATTATTGAGGAAGCTCATAACAGGGGAAGGAAGATATGTAC GCGGAGCAGGAGGTGTGTTCATAGCGGACGAAGTTCAAGTAGGCTTTGGCCGAGTTGGGA AACATTTCTGGAGCTTCCAAATGCTTGGTGAAGATTTCGTTCCAGACATCATCACCATGG GAAAACCAATGGGCAATGGCCACCCAATGGCATGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAGCCCCCTGGGAGCCCCCGGCATCCCGCCACCATGTGCGAGCTGTACAGCAAGCAAGA CACCCTGGCGTTGAGGAGGAAGCACATCGGGCCCTCTTGCAAAGTCTTCTTTGCTGCGGA TCCCATCAAAATAGTTCGAGCCCAGCGGCAGTACATGTTTGATGAGAAAGGCGACCGGTA CTTGGACTGCATCAACAATGTTGCCCACGTGGGACACTGCCACCCAGAAGTGGTCCAAGC TGCCCAGAAACAGATGGAACTGCTAAATACAAATTCTCGCTTCCTCCACGACAACATTGT TGAGTATGCCAAGCGCCTGTCATCAACCCTGCCGGACAAACTCTCCGTTTGCTATTTTAC AAACTCAGGATCTGAAGCCAATGACTTAGCCTTACGTCTGGCTCGGCAGTTCAGAGGCCA TCAAGACGTGATCACTCTTGACCATGCTTACCATGGTCACCTAACATCTTTAATTGAGAT CAGTCCATATAAATTTCAGCAGGGCAAAGATGTCAAGAAAGAATTTGTGCATGTGGCCCC ATCTCCAGATACTTACAGAGGTAAATACAGAGAAGACCATGCAGACCCGGCCGGTGCTTA TGCCGATGAAGTGAAGAAAATTATTGAGGAAGCTCATAACAGGGGAAGGAAGATATGTAC GCGGAGCAGGAGGTGTGTTCATAGCGGACGAAGTTCAAGTAGGCTTTGGCCGAGTTGGGA AACATTTCTGGAGCTTCCAAATGCTTGGTGAAGATTTCGTTCCAGACATCATCACCATGG GAAAACCAATGGGCAATGGCCACCCAATGGCATGTG |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 209-369, gnl|bosTau2|chr6 (5679825-5679985) | |
| 209-369, gnl|canFam2|chr32 (32011166-32011315) | |
| 209-369, gnl|danRer3|chr5 (16759820-16759687) | |
| 209-369, gnl|echTel1|scaffold_235554 (9455-9305) | |
| 209-369, gnl|fr1|chrUn (114170842-114170689) | |
| 209-369, gnl|galGal2|chr4 (38221056-38220914) | |
| 209-369, gnl|hg17|chr4 (110038485-110038635) | |
| 209-369, gnl|Hg17|chr4 (110038669-110038509) | |
| 209-369, gnl|loxAfr1|scaffold_162365 (714-556) | |
| 209-369, gnl|mm7|chr3 (130457307-130457156) | |
| 209-369, gnl|Mm7|chr3 (130457120-130457280) | |
| 209-369, gnl|monDom2|scaffold_37 (907743-907586) | |
| 209-369, gnl|panTro1|chr3 (126528373-126528523) | |
| 209-369, gnl|rheMac2|chr5 (101671528-101671678) | |
| 209-369, gnl|rn3|chr10 (37103269-37103141) | |
| 209-369, gnl|tetNig1|chr1 (928884-929011) | |
| 209-369, gnl|xenTro1|scaffold_520 (560096-559948) | |
| 651-814, gnl|bosTau2|chr6 (5689556-5689719) | |
| 651-814, gnl|canFam2|chr32 (32001692-32001938) | |
| 651-814, gnl|danRer3|chr5 (16766927-16766674) | |
| 651-814, gnl|dasNov1|scaffold_2515 (66213-65967) | |
| 651-814, gnl|echTel1|scaffold_290424 (44712-44465) | |
| 651-814, gnl|fr1|chrUn (114171796-114171552) | |
| 651-814, gnl|galGal2|chr4 (38227867-38227627) | |
| 651-814, gnl|hg17|chr4 (110027991-110028237) | |
| 651-814, gnl|Hg17|chr4 (110028225-110028062) | |
| 651-814, gnl|loxAfr1|scaffold_19119 (3432-3678) | |
| 651-814, gnl|mm7|chr3 (130466077-130465831) | |
| 651-814, gnl|Mm7|chr3 (130465841-130466004) | |
| 651-814, gnl|monDom2|scaffold_37 (918682-918436) | |
| 651-814, gnl|oryCun1|scaffold_189931 (704-458) | |
| 651-814, gnl|panTro1|chr3 (126517908-126518154) | |
| 651-814, gnl|rheMac2|chr5 (101660752-101660998) | |
| 651-814, gnl|rn3|chr10 (37111187-37110947) | |
| 651-814, gnl|tetNig1|chrUn_random (43720370-43720601) | |
| 651-814, gnl|xenTro1|scaffold_520 (569146-568900) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 209-369, gnl|bosTau2|chr6 (5679825-5679985) | |
| 209-369, gnl|canFam2|chr32 (32011166-32011315) | |
| 209-369, gnl|danRer3|chr5 (16759820-16759687) | |
| 209-369, gnl|echTel1|scaffold_235554 (9455-9305) | |
| 209-369, gnl|fr1|chrUn (114170842-114170689) | |
| 209-369, gnl|galGal2|chr4 (38221056-38220914) | |
| 209-369, gnl|hg17|chr4 (110038485-110038635) | |
| 209-369, gnl|Hg17|chr4 (110038669-110038509) | |
| 209-369, gnl|loxAfr1|scaffold_162365 (714-556) | |
| 209-369, gnl|mm7|chr3 (130457307-130457156) | |
| 209-369, gnl|Mm7|chr3 (130457120-130457280) | |
| 209-369, gnl|monDom2|scaffold_37 (907743-907586) | |
| 209-369, gnl|panTro1|chr3 (126528373-126528523) | |
| 209-369, gnl|rheMac2|chr5 (101671528-101671678) | |
| 209-369, gnl|rn3|chr10 (37103269-37103141) | |
| 209-369, gnl|tetNig1|chr1 (928884-929011) | |
| 209-369, gnl|xenTro1|scaffold_520 (560096-559948) | |
| 651-814, gnl|bosTau2|chr6 (5689556-5689719) | |
| 651-814, gnl|canFam2|chr32 (32001692-32001938) | |
| 651-814, gnl|danRer3|chr5 (16766927-16766674) | |
| 651-814, gnl|dasNov1|scaffold_2515 (66213-65967) | |
| 651-814, gnl|echTel1|scaffold_290424 (44712-44465) | |
| 651-814, gnl|fr1|chrUn (114171796-114171552) | |
| 651-814, gnl|galGal2|chr4 (38227867-38227627) | |
| 651-814, gnl|hg17|chr4 (110027991-110028237) | |
| 651-814, gnl|Hg17|chr4 (110028225-110028062) | |
| 651-814, gnl|loxAfr1|scaffold_19119 (3432-3678) | |
| 651-814, gnl|mm7|chr3 (130466077-130465831) | |
| 651-814, gnl|Mm7|chr3 (130465841-130466004) | |
| 651-814, gnl|monDom2|scaffold_37 (918682-918436) | |
| 651-814, gnl|oryCun1|scaffold_189931 (704-458) | |
| 651-814, gnl|panTro1|chr3 (126517908-126518154) | |
| 651-814, gnl|rheMac2|chr5 (101660752-101660998) | |
| 651-814, gnl|rn3|chr10 (37111187-37110947) | |
| 651-814, gnl|tetNig1|chrUn_random (43720370-43720601) | |
| 651-814, gnl|xenTro1|scaffold_520 (569146-568900) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lun (0.150489) | |
| ute (0.132784) |