Non-Coding RNA Search

Ss1.1-Pig3-SRG8023P09.5

Sequence:


               
               GAGGGAACCATGAGATAACAGCTTGACGTTTCATTGTTTTTCTCATTTAAACATCAGATT
CACTGAATGTACAAGTCAATACTTATTTGGAGAATAGTTCTCCTAAAATTTGAAACTTCA
CATGATGTTGGCATAGCAAGATGTTTCTGCTTCCAGCCTTCAGGAATGGAGATCTGATCA
TAATTTACCTCGAAGGCTGTTATCTTACAATAAAGACTGAGCGAGAACAAATTGTCACAT
GTTCCTGATGCTGTAATTCAATAGTATTGTCACTGTCACTAAAGCCTGTCAGGATATTAA
GCATCTCAGTAGAAAAATGAGAAACGATATATGTAGAAAACCAAAGTGCTATTTTTGCAG
CATCATTTTCAAAACTACATTCTTGAACAGCTTTCCCCCTTTCCACACATCCCCTCTCAC
CTCCGATTTGGCAACATCCGTCACACTGACAACTCAAGAAGGGTTTAAAACAACAAATCT
TTCAAAAATCAAGGTAACGCCCAAGCACAGGGCGCATGCACCTGATTTTCCGAATGTGAT
GTGTCCTCAAGCCTGACACAAGCACAAAGGCAGCTTGATATGCTTCTGAAAGCTTCCAAA
AACAACTGTACATGGATCATCTCTCTCTTGAGAAGAGCATAGCAACAGAATATATTGCTC
TTGGTGTAAGGTTTTGTAGTAAACTTTTTACTTATTCTCGTTCTCTAAGAAAGCTTTCTA
TTTCTAACCTGTGGCAAGACGAACTCTTCATGTCTTCTTGTTCTTGTTGACACATCCGCA
GCGTAGCCCATGTTGAAATATTTGTCTGGTTGTCAGATCTCTGCGCTGTCCCTGGATCTT
CTCAGGCCTCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGGAACCATGAGATAACAGCTTGACGTTTCATTGTTTTTCTCATTTAAACATCAGATT
CACTGAATGTACAAGTCAATACTTATTTGGAGAATAGTTCTCCTAAAATTTGAAACTTCA
CATGATGTTGGCATAGCAAGATGTTTCTGCTTCCAGCCTTCAGGAATGGAGATCTGATCA
TAATTTACCTCGAAGGCTGTTATCTTACAATAAAGACTGAGCGAGAACAAATTGTCACAT
GTTCCTGATGCTGTAATTCAATAGTATTGTCACTGTCACTAAAGCCTGTCAGGATATTAA
GCATCTCAGTAGAAAAATGAGAAACGATATATGTAGAAAACCAAAGTGCTATTTTTGCAG
CATCATTTTCAAAACTACATTCTTGAACAGCTTTCCCCCTTTCCACACATCCCCTCTCAC
CTCCGATTTGGCAACATCCGTCACACTGACAACTCAAGAAGGGTTTAAAACAACAAATCT
TTCAAAAATCAAGGTAACGCCCAAGCACAGGGCGCATGCACCTGATTTTCCGAATGTGAT
GTGTCCTCAAGCCTGACACAAGCACAAAGGCAGCTTGATATGCTTCTGAAAGCTTCCAAA
AACAACTGTACATGGATCATCTCTCTCTTGAGAAGAGCATAGCAACAGAATATATTGCTC
TTGGTGTAAGGTTTTGTAGTAAACTTTTTACTTATTCTCGTTCTCTAAGAAAGCTTTCTA
TTTCTAACCTGTGGCAAGACGAACTCTTCATGTCTTCTTGTTCTTGTTGACACATCCGCA
GCGTAGCCCATGTTGAAATATTTGTCTGGTTGTCAGATCTCTGCGCTGTCCCTGGATCTT
CTCAGGCCTCCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               9-852, gnl|bosTau2|chr13 (10981865-10981005)
               

               
               9-852, gnl|Hg17|chr10 (21112466-21111615)
               

               
               9-852, gnl|Mm7|chr2 (17411650-17410761)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-852, gnl|bosTau2|chr13 (10981865-10981005)
               

               
               9-852, gnl|Hg17|chr10 (21112466-21111615)
               

               
               9-852, gnl|Mm7|chr2 (17411650-17410761)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hea (0.204499)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)

	9-852, gnl\|bosTau2\|chr13 (10981865-10981005)
	9-852, gnl\|Hg17\|chr10 (21112466-21111615)
	9-852, gnl\|Mm7\|chr2 (17411650-17410761)