Non-Coding RNA Search

Ss1.1-Pig3-SRG8023P14.3

Sequence:


               
               CCTCCCAAGTCAGTCTTCAATTATGAGAAATTACTTTCTGCATAATTACATACAATAGAA
CATATACATCAAGTATTGTGATTACATGAGGAAAATAACTAAAACCAAATACAGTCACTG
AGGCTTCAGAATTTTTTTAAAACTGCATTTTACCTATAGTAAAAACCCATCGTTTTAGTT
TTACAGCCCTCTCTAAATTTCAAATTAAAGAAAATAACTGAAAAAGATTATTTTATATCG
ATGACCAACAGTGATGAGTCATTCAGTTAGCAAAAACTAAATGCTCTAAAGGTACTAGGA
AAAAAGCTGTTTATCACTAAATAAGGCGTGCAGATAAGCAAACTCTTTGGGAACTTTTAT
CTGCCTTGTTTGGTTTTCCTGGCACACCTCATTGTGTTTTCTCCATTTTATCATTAAGTT
TTAGGTCAGAAGTATAAGGCAGAGGGGCTTCTGTAGTTAAAATTTGCATGATTACGTCTG
TTTTTTTCCTCGTGACATATAATTTGGGTAGCAGTTTCTATAAGCTAGTTCTTCTAATTT
AACCATGAAATATTAAAACCAATTTCAAAAATGAAAGCACAAAAATTATCTAGGTTTTGA
TCTTAATATAAAATAAAGTCAGTAATTATAAAACAAGAATTATATGCCCTTAGAATGTAG
TGTTTTACCCTATTAAATTTGCCAGTATTGCAAACCATTATTTACTGGAACTGCTTTATT
AGATATTCATATTCACAAACTCAATTAGGAAAAAGTTAGCAAGTCAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTCCCAAGTCAGTCTTCAATTATGAGAAATTACTTTCTGCATAATTACATACAATAGAA
CATATACATCAAGTATTGTGATTACATGAGGAAAATAACTAAAACCAAATACAGTCACTG
AGGCTTCAGAATTTTTTTAAAACTGCATTTTACCTATAGTAAAAACCCATCGTTTTAGTT
TTACAGCCCTCTCTAAATTTCAAATTAAAGAAAATAACTGAAAAAGATTATTTTATATCG
ATGACCAACAGTGATGAGTCATTCAGTTAGCAAAAACTAAATGCTCTAAAGGTACTAGGA
AAAAAGCTGTTTATCACTAAATAAGGCGTGCAGATAAGCAAACTCTTTGGGAACTTTTAT
CTGCCTTGTTTGGTTTTCCTGGCACACCTCATTGTGTTTTCTCCATTTTATCATTAAGTT
TTAGGTCAGAAGTATAAGGCAGAGGGGCTTCTGTAGTTAAAATTTGCATGATTACGTCTG
TTTTTTTCCTCGTGACATATAATTTGGGTAGCAGTTTCTATAAGCTAGTTCTTCTAATTT
AACCATGAAATATTAAAACCAATTTCAAAAATGAAAGCACAAAAATTATCTAGGTTTTGA
TCTTAATATAAAATAAAGTCAGTAATTATAAAACAAGAATTATATGCCCTTAGAATGTAG
TGTTTTACCCTATTAAATTTGCCAGTATTGCAAACCATTATTTACTGGAACTGCTTTATT
AGATATTCATATTCACAAACTCAATTAGGAAAAAGTTAGCAAGTCAAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               5-768, gnl|bosTau2|chr14 (18687879-18687117)
               

               
               5-768, gnl|Hg17|chr8 (65667466-65666421)
               

               
               5-768, gnl|Mm7|chr3 (17791048-17790407)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-768, gnl|bosTau2|chr14 (18687879-18687117)
               

               
               5-768, gnl|Hg17|chr8 (65667466-65666421)
               

               
               5-768, gnl|Mm7|chr3 (17791048-17790407)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               clu (0.358938)
               

               
               eye (0.170503)
               

               
               lun (0.150489)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.358938)
               

               
               eye (0.170503)
               

               
               lun (0.150489)

	5-768, gnl\|bosTau2\|chr14 (18687879-18687117)
	5-768, gnl\|Hg17\|chr8 (65667466-65666421)
	5-768, gnl\|Mm7\|chr3 (17791048-17790407)