Ss1.1-Pig3-SRG8024D04.5
|
ACGGGTGTAGAGGGCCGTGGGACCGCGGAGACGGGACCTGCTTTGGGGGCATGAGCCGAG
GAGAGGACTCCGAAGTCACGAGTATTTCATAGAGATTGATGGAAGCAGAAACCAAAACTC
TTCCCCTGGAGAACGCATCCATCCTTTCAGAGGGTTCCCTGCAGGAAGGGCACCGGTTAT
GGATCGGCAACCTGGACCCCAAAATCACAGAATACCACCTCCTCAAGCTCTTGCAGAAGT
TTGGCACAGTGAAGCAGTTTGACTTCCTCTTCCACAAGTCAGGTGCTCTGGAGGGACAGC
CTCGAGGGTATTGTTTCGTTAACTTTGAGACAAAGCAGGAAGCAGAACAAGCCATCCATT
GTCTCAATGGCAAGCTGGCTCTGTCTAAGAAGCTGGTGGTACGATGGGCACACGCTCAAG
TAAAGAGATATGATCATAACAAGAATGACAAGATCCTTCCCATTAGTCTGGAGCCGTCCT
CCAGCACCGAGCCCGCTCAGTCTAACCTCAGTGTCACTGCAAAGATAAAAGCCATTGAAG
CAAAGCTGAAAATGATGGCAGAAAATCCTGATGCCGAGTATCCAGCAGCACCAGTTTATT
CCTACTTCAAGCCACCAGATAAAAAAAGGACTACTCCCTATTCTAGAACAGCTTGGAAAT
CTCGAAGATGATGGTTATGAATCACTGTAACAGCAAAAGCAAATCGGTCTTCACACCTGA
AATCCTCTGCCTTTGTACTTGTAGATGTGAATGGTACTATCAGACAGAGCACAATCACAT
GGTAGAGTTTGGTAACAACATTTTTGGATGTTCTTCTGAATGTTTCTTCCCTGAAGTATG
TGTAGAATTGAGCATCATCCAGAATAAATAGGATTGTATCCAAAACTGATTTGAACACTG
AGATGCTCTAATTGGCTGGTTTGTTTGGATTTGTAACTCCAGAAACTTTGTATAGTGTGC
CAGAGAGAAAGGCAAACACAAAAAAAATGTTATTATTTAAATCAGGAAACTTAATTTATT
AACATCTGTCTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACGGGTGTAGAGGGCCGTGGGACCGCGGAGACGGGACCTGCTTTGGGGGCATGAGCCGAG
GAGAGGACTCCGAAGTCACGAGTATTTCATAGAGATTGATGGAAGCAGAAACCAAAACTC
TTCCCCTGGAGAACGCATCCATCCTTTCAGAGGGTTCCCTGCAGGAAGGGCACCGGTTAT
GGATCGGCAACCTGGACCCCAAAATCACAGAATACCACCTCCTCAAGCTCTTGCAGAAGT
TTGGCACAGTGAAGCAGTTTGACTTCCTCTTCCACAAGTCAGGTGCTCTGGAGGGACAGC
CTCGAGGGTATTGTTTCGTTAACTTTGAGACAAAGCAGGAAGCAGAACAAGCCATCCATT
GTCTCAATGGCAAGCTGGCTCTGTCTAAGAAGCTGGTGGTACGATGGGCACACGCTCAAG
TAAAGAGATATGATCATAACAAGAATGACAAGATCCTTCCCATTAGTCTGGAGCCGTCCT
CCAGCACCGAGCCCGCTCAGTCTAACCTCAGTGTCACTGCAAAGATAAAAGCCATTGAAG
CAAAGCTGAAAATGATGGCAGAAAATCCTGATGCCGAGTATCCAGCAGCACCAGTTTATT
CCTACTTCAAGCCACCAGATAAAAAAAGGACTACTCCCTATTCTAGAACAGCTTGGAAAT
CTCGAAGATGATGGTTATGAATCACTGTAACAGCAAAAGCAAATCGGTCTTCACACCTGA
AATCCTCTGCCTTTGTACTTGTAGATGTGAATGGTACTATCAGACAGAGCACAATCACAT
GGTAGAGTTTGGTAACAACATTTTTGGATGTTCTTCTGAATGTTTCTTCCCTGAAGTATG
TGTAGAATTGAGCATCATCCAGAATAAATAGGATTGTATCCAAAACTGATTTGAACACTG
AGATGCTCTAATTGGCTGGTTTGTTTGGATTTGTAACTCCAGAAACTTTGTATAGTGTGC
CAGAGAGAAAGGCAAACACAAAAAAAATGTTATTATTTAAATCAGGAAACTTAATTTATT
AACATCTGTCTT
|
|
gi|55731580|emb|CAH92497.1| |
Protein identifier
|
gi|55731580|emb|CAH92497.1| |
|
81-214, gnl|bosTau2|chr11 (73877538-73877671) |
|
81-214, gnl|canFam2|chr9 (63659824-63659704) |
|
81-214, gnl|danRer3|chr10 (4040056-4040168) |
|
81-214, gnl|dasNov1|scaffold_41366 (5293-5413) |
|
81-214, gnl|echTel1|scaffold_320271 (129709-129589) |
|
81-214, gnl|galGal2|chr17 (1683481-1683364) |
|
81-214, gnl|hg17|chr9 (122103206-122103326) |
|
81-214, gnl|Hg17|chr9 (122103343-122103210) |
|
81-214, gnl|loxAfr1|scaffold_159331 (1008-1129) |
|
81-214, gnl|mm7|chr2 (36141439-36141559) |
|
81-214, gnl|Mm7|chr2 (36141576-36141443) |
|
81-214, gnl|oryCun1|scaffold_212100 (126411-126532) |
|
81-214, gnl|panTro1|chr11 (106781524-106781644) |
|
81-214, gnl|rheMac2|chr15 (13742374-13742254) |
|
81-214, gnl|rn3|chr3 (15140136-15140256) |
|
81-214, gnl|tetNig1|chr4 (1109897-1109807) |
|
81-214, gnl|xenTro1|scaffold_871 (126048-126168) |
| |
|
509-1032, gnl|bosTau2|chr11 (73894403-73894910) |
|
509-1032, gnl|Hg17|chr9 (122083879-122083358) |
|
509-1032, gnl|Mm7|chr2 (36125288-36124776) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
81-214, gnl|bosTau2|chr11 (73877538-73877671) |
|
81-214, gnl|canFam2|chr9 (63659824-63659704) |
|
81-214, gnl|danRer3|chr10 (4040056-4040168) |
|
81-214, gnl|dasNov1|scaffold_41366 (5293-5413) |
|
81-214, gnl|echTel1|scaffold_320271 (129709-129589) |
|
81-214, gnl|galGal2|chr17 (1683481-1683364) |
|
81-214, gnl|hg17|chr9 (122103206-122103326) |
|
81-214, gnl|Hg17|chr9 (122103343-122103210) |
|
81-214, gnl|loxAfr1|scaffold_159331 (1008-1129) |
|
81-214, gnl|mm7|chr2 (36141439-36141559) |
|
81-214, gnl|Mm7|chr2 (36141576-36141443) |
|
81-214, gnl|oryCun1|scaffold_212100 (126411-126532) |
|
81-214, gnl|panTro1|chr11 (106781524-106781644) |
|
81-214, gnl|rheMac2|chr15 (13742374-13742254) |
|
81-214, gnl|rn3|chr3 (15140136-15140256) |
|
81-214, gnl|tetNig1|chr4 (1109897-1109807) |
|
81-214, gnl|xenTro1|scaffold_871 (126048-126168) |
| |
|
509-1032, gnl|bosTau2|chr11 (73894403-73894910) |
|
509-1032, gnl|Hg17|chr9 (122083879-122083358) |
|
509-1032, gnl|Mm7|chr2 (36125288-36124776) |
|
pla (0.534688) |
|
pro (0.512033) |
|
vin (0.332557) |
|
spl (0.286369) |
|
hea (0.204499) |
|
col (0.195008) |
|
fty (0.17584) |
|
ill (0.175593) |
|
ese (0.126502) |
|
tra (0.123092) |
|
pla (0.534688) |
|
pro (0.512033) |
|
vin (0.332557) |
|
spl (0.286369) |
|
hea (0.204499) |
|
col (0.195008) |
|
fty (0.17584) |
|
ill (0.175593) |
|
ese (0.126502) |
|
tra (0.123092) |
