Non-Coding RNA Search

Ss1.1-Pig3-SRG8024D10.3

Sequence:


               
               TTACTTGAGATATTGTCAGCTTCCAACAGGGTGCTGTAGTTGTCTGTTTTCTGGCTCTGA
GGGCCTCGCCTCCAATTTAAGTCAAGATATAGATTGAATTTCCATTTTGTTCCATTTATA
ATATGAATGATATTAATACTCATGTTTGCCTAACGATATGTTGGAATATTCTCTGTCTTT
AATCTGCCTCACAGCAAGATGGGGAGCCATCTGGAAGTAACTTTTCCTTCTGTCTTTCTT
TGATCACTTACCACTTATGCCCATGTGGGGGGAAAAAAACTTTAAAAGGAGAGGAGGTCT
TCCTAGGGATCTCGTTGGAAGCTGTCTGGGAACATCAACGTGAAACACCCCCTCCGCTAC
TCTAGACATCTCACCTCAGTCCAAGTATGGAACCCCGGAGGAGGCAAGAGCAAGAGGGAA
ATGCATCTCTGCACAACAGGTCCAAGGTCATTGTCACCAAAGCAGGCTGGGACTACATCT
CCCATCCCCAACAGCTGTTCTTTCTCAGAGGTGAAACACCAGATCCTTTGAGGCTGTGGA
TTTACTCTCAGAGATTTGTGGGTTCCCAGGAGGCAAAGCACAAGGAGAATATAATTAAGG
CCTGGTCTCTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTACTTGAGATATTGTCAGCTTCCAACAGGGTGCTGTAGTTGTCTGTTTTCTGGCTCTGA
GGGCCTCGCCTCCAATTTAAGTCAAGATATAGATTGAATTTCCATTTTGTTCCATTTATA
ATATGAATGATATTAATACTCATGTTTGCCTAACGATATGTTGGAATATTCTCTGTCTTT
AATCTGCCTCACAGCAAGATGGGGAGCCATCTGGAAGTAACTTTTCCTTCTGTCTTTCTT
TGATCACTTACCACTTATGCCCATGTGGGGGGAAAAAAACTTTAAAAGGAGAGGAGGTCT
TCCTAGGGATCTCGTTGGAAGCTGTCTGGGAACATCAACGTGAAACACCCCCTCCGCTAC
TCTAGACATCTCACCTCAGTCCAAGTATGGAACCCCGGAGGAGGCAAGAGCAAGAGGGAA
ATGCATCTCTGCACAACAGGTCCAAGGTCATTGTCACCAAAGCAGGCTGGGACTACATCT
CCCATCCCCAACAGCTGTTCTTTCTCAGAGGTGAAACACCAGATCCTTTGAGGCTGTGGA
TTTACTCTCAGAGATTTGTGGGTTCCCAGGAGGCAAAGCACAAGGAGAATATAATTAAGG
CCTGGTCTCTAG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               27-612, gnl|bosTau2|chr2 (79861722-79862306)
               

               
               27-612, gnl|Hg17|chr1 (25971318-25970764)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               27-612, gnl|bosTau2|chr2 (79861722-79862306)
               

               
               27-612, gnl|Hg17|chr1 (25971318-25970764)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               tbr (0.154178)
               

               
               cly (0.120642)
               

               
               nbm (0.0993246)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)
               

               
               cly (0.120642)
               

               
               nbm (0.0993246)

	27-612, gnl\|bosTau2\|chr2 (79861722-79862306)
	27-612, gnl\|Hg17\|chr1 (25971318-25970764)