Ss1.1-Pig3-SRG8024E24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAATGCATCCCAGTGCTTTGAGAAAGTCTTGAAAGCTTATCCTAATAATTATGAAACTAT GAAAATTCTGGGCTCTCTATATGCTGCCTCGGAAGATCAAGAAAAACGAGATATCGCTAA GGGCCATTTGAAGAAGGTCACAGAACAGTATCCTGATGACGTTGAAGCATGGATTGAATT GGCACAAATCTTATAACAGACGGATATACAGGGTGCCCTGTCAGCCTACGGAACAGCAAC ACGGATCCTTCAAGAATGCAAACAGACTTTGCTGAAAGCTAGACATGTGGCGCCCATTGA TACAGTTCTTATGTTTAATGTGGCCTTGGTCCTGCAAAGATTAGCTACCTCTGTCCTGAA AGATGAAAAGAGTAATCTGAAGGAAGTACTTAATGCTGTGAAAGAACTGGAGCTGGCACA CAGATACTTCAGCTACTTGAGTAAAGTGGGAGATAAAATGAGATTCGATTTGGCCCTCGC TGCTACAGAAGCCAGGCAATGCTCTGACTTGCTGAGCCAGGCCCAGTACCACGTGGCCCG GGCACGCAAACAAGATGAAGATGAAAGGGAGTTGCGGGCCAAACAAGAGCAAGATAAAGA ACTGTTAAGGCAAAAGCTTCTCAAAGAACAGGAAGAGAAACGTCTCAGAGAAAAAGAAGA GCAAAAGAAACTTTTGGAACAGCGAGCCCAGTATGTAGAGAAGACCAAAAATATTCTTAT GTTTACTGGAGAGACTGAAGCAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAATGCATCCCAGTGCTTTGAGAAAGTCTTGAAAGCTTATCCTAATAATTATGAAACTAT GAAAATTCTGGGCTCTCTATATGCTGCCTCGGAAGATCAAGAAAAACGAGATATCGCTAA GGGCCATTTGAAGAAGGTCACAGAACAGTATCCTGATGACGTTGAAGCATGGATTGAATT GGCACAAATCTTATAACAGACGGATATACAGGGTGCCCTGTCAGCCTACGGAACAGCAAC ACGGATCCTTCAAGAATGCAAACAGACTTTGCTGAAAGCTAGACATGTGGCGCCCATTGA TACAGTTCTTATGTTTAATGTGGCCTTGGTCCTGCAAAGATTAGCTACCTCTGTCCTGAA AGATGAAAAGAGTAATCTGAAGGAAGTACTTAATGCTGTGAAAGAACTGGAGCTGGCACA CAGATACTTCAGCTACTTGAGTAAAGTGGGAGATAAAATGAGATTCGATTTGGCCCTCGC TGCTACAGAAGCCAGGCAATGCTCTGACTTGCTGAGCCAGGCCCAGTACCACGTGGCCCG GGCACGCAAACAAGATGAAGATGAAAGGGAGTTGCGGGCCAAACAAGAGCAAGATAAAGA ACTGTTAAGGCAAAAGCTTCTCAAAGAACAGGAAGAGAAACGTCTCAGAGAAAAAGAAGA GCAAAAGAAACTTTTGGAACAGCGAGCCCAGTATGTAGAGAAGACCAAAAATATTCTTAT GTTTACTGGAGAGACTGAAGCAAC |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 2-122, gnl|bosTau2|chr15 (26739125-26739245) | |
| 2-122, gnl|canFam2|chr21 (37124702-37124832) | |
| 2-122, gnl|danRer3|chrNA (60937449-60937315) | |
| 2-122, gnl|dasNov1|scaffold_1513 (185852-185722) | |
| 2-122, gnl|echTel1|scaffold_306728 (3234-3365) | |
| 2-122, gnl|fr1|chrUn (37046012-37045881) | |
| 2-122, gnl|galGal2|chr5 (6310925-6310790) | |
| 2-122, gnl|hg17|chr11 (10741879-10742013) | |
| 2-122, gnl|Hg17|chr11 (10741883-10742003) | |
| 2-122, gnl|loxAfr1|scaffold_3868 (28727-28858) | |
| 2-122, gnl|mm7|chr7 (106958665-106958794) | |
| 2-122, gnl|Mm7|chr7 (106958669-106958789) | |
| 2-122, gnl|monDom2|scaffold_10 (61046777-61046905) | |
| 2-122, gnl|oryCun1|scaffold_199582 (52162-52291) | |
| 2-122, gnl|panTro1|chr9 (10977747-10977881) | |
| 2-122, gnl|rheMac2|chr14 (61180582-61180448) | |
| 2-122, gnl|rn3|chr1 (168912272-168912401) | |
| 2-122, gnl|tetNig1|chr5 (6291803-6291672) | |
| 2-122, gnl|xenTro1|scaffold_621 (113221-113347) | |
| 278-426, gnl|bosTau2|chr15 (26744907-26745055) | |
| 278-426, gnl|canFam2|chr21 (37130318-37130475) | |
| 278-426, gnl|danRer3|chrNA (60927169-60927012) | |
| 278-426, gnl|dasNov1|scaffold_1513 (180746-180589) | |
| 278-426, gnl|echTel1|scaffold_306728 (10987-11144) | |
| 278-426, gnl|fr1|chrUn (37044067-37043916) | |
| 278-426, gnl|galGal2|chr5 (6304889-6304732) | |
| 278-426, gnl|hg17|chr11 (10748607-10748764) | |
| 278-426, gnl|Hg17|chr11 (10748610-10748759) | |
| 278-426, gnl|loxAfr1|scaffold_33529 (4557-4714) | |
| 278-426, gnl|mm7|chr7 (106965033-106965190) | |
| 278-426, gnl|Mm7|chr7 (106965036-106965184) | |
| 278-426, gnl|monDom2|scaffold_10 (61054242-61054404) | |
| 278-426, gnl|oryCun1|scaffold_162830 (8918-9075) | |
| 278-426, gnl|panTro1|chr9 (10984464-10984621) | |
| 278-426, gnl|rheMac2|chr14 (61174035-61173878) | |
| 278-426, gnl|rn3|chr1 (168918149-168918306) | |
| 278-426, gnl|tetNig1|chr5 (6289900-6289748) | |
| 278-426, gnl|xenTro1|scaffold_621 (117085-117242) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-122, gnl|bosTau2|chr15 (26739125-26739245) | |
| 2-122, gnl|canFam2|chr21 (37124702-37124832) | |
| 2-122, gnl|danRer3|chrNA (60937449-60937315) | |
| 2-122, gnl|dasNov1|scaffold_1513 (185852-185722) | |
| 2-122, gnl|echTel1|scaffold_306728 (3234-3365) | |
| 2-122, gnl|fr1|chrUn (37046012-37045881) | |
| 2-122, gnl|galGal2|chr5 (6310925-6310790) | |
| 2-122, gnl|hg17|chr11 (10741879-10742013) | |
| 2-122, gnl|Hg17|chr11 (10741883-10742003) | |
| 2-122, gnl|loxAfr1|scaffold_3868 (28727-28858) | |
| 2-122, gnl|mm7|chr7 (106958665-106958794) | |
| 2-122, gnl|Mm7|chr7 (106958669-106958789) | |
| 2-122, gnl|monDom2|scaffold_10 (61046777-61046905) | |
| 2-122, gnl|oryCun1|scaffold_199582 (52162-52291) | |
| 2-122, gnl|panTro1|chr9 (10977747-10977881) | |
| 2-122, gnl|rheMac2|chr14 (61180582-61180448) | |
| 2-122, gnl|rn3|chr1 (168912272-168912401) | |
| 2-122, gnl|tetNig1|chr5 (6291803-6291672) | |
| 2-122, gnl|xenTro1|scaffold_621 (113221-113347) | |
| 278-426, gnl|bosTau2|chr15 (26744907-26745055) | |
| 278-426, gnl|canFam2|chr21 (37130318-37130475) | |
| 278-426, gnl|danRer3|chrNA (60927169-60927012) | |
| 278-426, gnl|dasNov1|scaffold_1513 (180746-180589) | |
| 278-426, gnl|echTel1|scaffold_306728 (10987-11144) | |
| 278-426, gnl|fr1|chrUn (37044067-37043916) | |
| 278-426, gnl|galGal2|chr5 (6304889-6304732) | |
| 278-426, gnl|hg17|chr11 (10748607-10748764) | |
| 278-426, gnl|Hg17|chr11 (10748610-10748759) | |
| 278-426, gnl|loxAfr1|scaffold_33529 (4557-4714) | |
| 278-426, gnl|mm7|chr7 (106965033-106965190) | |
| 278-426, gnl|Mm7|chr7 (106965036-106965184) | |
| 278-426, gnl|monDom2|scaffold_10 (61054242-61054404) | |
| 278-426, gnl|oryCun1|scaffold_162830 (8918-9075) | |
| 278-426, gnl|panTro1|chr9 (10984464-10984621) | |
| 278-426, gnl|rheMac2|chr14 (61174035-61173878) | |
| 278-426, gnl|rn3|chr1 (168918149-168918306) | |
| 278-426, gnl|tetNig1|chr5 (6289900-6289748) | |
| 278-426, gnl|xenTro1|scaffold_621 (117085-117242) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.114797) |