Ss1.1-Pig3-SRG8024I12.3
|
CTGGTGGTGGCCGACTTTGGCTGTGGGGATTGCCGCCTGGCCTCGAGCATCCGGAATCCT
GTGCACTGCTTTGACTTGGCCTCCCTGGACCCCAGGGTCACCGTGTGTGACATGGCCCAG
GTGCCTCTGGAGGATGCGTCTGTGGACGTGGCCGTGTTCTGCCTTTCACTGATGGGAACC
AACATCCGAGACTTCCTAGAGGAGGCCAATCGTGTACTGAAGCCAGGGGGTCTCCTGAAA
GTGGCTGAGGTCAGCAGCCGCTTCGAAGATGTTCGGACCTTCCTGGGGGCTGTCGCCAAA
CTGGGCTTCAAGGTCATCTCCAAGGACCTGACCAACAGCCATTTCTTCCTGTTCGACTTT
CAAAAGACTGGGCCCCCTCGGGTAGGGCCCAAGGCTCAACTCGCAGGCCTGAAGCTTCAG
CCCTGTCTCTACAAGCGCAGGTGACCTCTGGACCCCCCTTGGAAAGGGAGGCAAATCTTG
AACCCCAGGCTCAGACTGTTCCCGGCCAGGCTGTGACCCAGGACGTGGTCACCCTTCCTC
CGTCCCACAAGCAAAATGTAATGTGCGCCCTGGCTCAGTCTTGCTTTAATGAAGGCTTCT
TGGTTCCAGGAAGTGTAAGGTCGTTTGGGCTGCAGCTGAAGAACAAGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTGGTGGTGGCCGACTTTGGCTGTGGGGATTGCCGCCTGGCCTCGAGCATCCGGAATCCT
GTGCACTGCTTTGACTTGGCCTCCCTGGACCCCAGGGTCACCGTGTGTGACATGGCCCAG
GTGCCTCTGGAGGATGCGTCTGTGGACGTGGCCGTGTTCTGCCTTTCACTGATGGGAACC
AACATCCGAGACTTCCTAGAGGAGGCCAATCGTGTACTGAAGCCAGGGGGTCTCCTGAAA
GTGGCTGAGGTCAGCAGCCGCTTCGAAGATGTTCGGACCTTCCTGGGGGCTGTCGCCAAA
CTGGGCTTCAAGGTCATCTCCAAGGACCTGACCAACAGCCATTTCTTCCTGTTCGACTTT
CAAAAGACTGGGCCCCCTCGGGTAGGGCCCAAGGCTCAACTCGCAGGCCTGAAGCTTCAG
CCCTGTCTCTACAAGCGCAGGTGACCTCTGGACCCCCCTTGGAAAGGGAGGCAAATCTTG
AACCCCAGGCTCAGACTGTTCCCGGCCAGGCTGTGACCCAGGACGTGGTCACCCTTCCTC
CGTCCCACAAGCAAAATGTAATGTGCGCCCTGGCTCAGTCTTGCTTTAATGAAGGCTTCT
TGGTTCCAGGAAGTGTAAGGTCGTTTGGGCTGCAGCTGAAGAACAAGG
|
|
gi|50766659|ref|XP_423009.1| |
Protein identifier
|
gi|50766659|ref|XP_423009.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-122, gnl|bosTau2|chr15 (32769601-32769480) |
|
1-122, gnl|canFam2|chr21 (33095793-33096034) |
|
1-122, gnl|danRer3|chr15 (14477689-14477512) |
|
1-122, gnl|dasNov1|scaffold_32685 (12237-12462) |
|
1-122, gnl|echTel1|scaffold_308473 (43427-43197) |
|
1-122, gnl|fr1|chrUn (15424389-15424174) |
|
1-122, gnl|galGal2|chr1 (188003802-188003613) |
|
1-122, gnl|hg17|chr11 (6578672-6578904) |
|
1-122, gnl|Hg17|chr11 (6578851-6578730) |
|
1-122, gnl|loxAfr1|scaffold_95418 (3928-4159) |
|
1-122, gnl|mm7|chr7 (101790133-101790365) |
|
1-122, gnl|Mm7|chr7 (101790308-101790187) |
|
1-122, gnl|monDom2|scaffold_43 (18333181-18332968) |
|
1-122, gnl|oryCun1|scaffold_211626 (16493-16267) |
|
1-122, gnl|panTro1|chr9 (6722081-6722313) |
|
1-122, gnl|rheMac2|chr14 (65602100-65601868) |
|
1-122, gnl|rn3|chr1 (163573828-163574060) |
|
1-122, gnl|tetNig1|chr16 (4152771-4152969) |
| |
|
320-648, gnl|bosTau2|chr15 (32768843-32768504) |
|
320-648, gnl|Hg17|chr11 (6578076-6577743) |
|
320-648, gnl|Mm7|chr7 (101789569-101789237) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-122, gnl|bosTau2|chr15 (32769601-32769480) |
|
1-122, gnl|canFam2|chr21 (33095793-33096034) |
|
1-122, gnl|danRer3|chr15 (14477689-14477512) |
|
1-122, gnl|dasNov1|scaffold_32685 (12237-12462) |
|
1-122, gnl|echTel1|scaffold_308473 (43427-43197) |
|
1-122, gnl|fr1|chrUn (15424389-15424174) |
|
1-122, gnl|galGal2|chr1 (188003802-188003613) |
|
1-122, gnl|hg17|chr11 (6578672-6578904) |
|
1-122, gnl|Hg17|chr11 (6578851-6578730) |
|
1-122, gnl|loxAfr1|scaffold_95418 (3928-4159) |
|
1-122, gnl|mm7|chr7 (101790133-101790365) |
|
1-122, gnl|Mm7|chr7 (101790308-101790187) |
|
1-122, gnl|monDom2|scaffold_43 (18333181-18332968) |
|
1-122, gnl|oryCun1|scaffold_211626 (16493-16267) |
|
1-122, gnl|panTro1|chr9 (6722081-6722313) |
|
1-122, gnl|rheMac2|chr14 (65602100-65601868) |
|
1-122, gnl|rn3|chr1 (163573828-163574060) |
|
1-122, gnl|tetNig1|chr16 (4152771-4152969) |
| |
|
320-648, gnl|bosTau2|chr15 (32768843-32768504) |
|
320-648, gnl|Hg17|chr11 (6578076-6577743) |
|
320-648, gnl|Mm7|chr7 (101789569-101789237) |
|
eye (0.170503) |
|
nje (0.16592) |
|
cag (0.151194) |
|
bla (0.124347) |
|
ecc (0.115035) |
|
jca (0.11396) |
|
eye (0.170503) |
|
nje (0.16592) |
|
cag (0.151194) |
|
bla (0.124347) |
|
ecc (0.115035) |
|
jca (0.11396) |
