Non-Coding RNA Search

Ss1.1-Pig3-SRG8024J23.3

Sequence:


               
               CACGCTGGGTTACTACACCCACCAGGAGCAGCAGAGCAAGAAGAGCAAGAGCCTCTTCCT
GATGACTCGAGCCCAGCCCCCGTTTCAAAGTTTATCATTACCAGTTCAAGATCCAGTTCA
TCAACCAAACTGAGAAACCAGTAGAACCAGCTTTTTCCATGTCACTCCTTGGAACTAAAG
AGGAAATGCAGAAAATTCCCATCACTCTGAGCAAAGGAATTATTAGTAATAAAACCTATT
CCTTTCTTATCACGTTGGATGTGGATATTGGTGAGCTGATCATGATCAAGTTCAAGTGGG
AAAACAGTGCAGCGTGGGCCAATGTCTGGAACACGGTCCAAATCATAATTCCATGGGGAA
GAGAGCCTGTCTACTCAGGCCTTGTTCTGAAGAGCATCAAAGTCAAAGCAGGAGAAACCC
AGCAAAGAATGACATTTTGCCCAGAAAACATGAATGATCTACAACTTCACCCAACCCAGG
AGAAAACCTTTGTGAGATGTGAAGCAAACTCTAAAAAATTGAAACGAAAGATCAGATGAG
CTTTCATGAAGACCCAATATGAAAATAAATGATTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACGCTGGGTTACTACACCCACCAGGAGCAGCAGAGCAAGAAGAGCAAGAGCCTCTTCCT
GATGACTCGAGCCCAGCCCCCGTTTCAAAGTTTATCATTACCAGTTCAAGATCCAGTTCA
TCAACCAAACTGAGAAACCAGTAGAACCAGCTTTTTCCATGTCACTCCTTGGAACTAAAG
AGGAAATGCAGAAAATTCCCATCACTCTGAGCAAAGGAATTATTAGTAATAAAACCTATT
CCTTTCTTATCACGTTGGATGTGGATATTGGTGAGCTGATCATGATCAAGTTCAAGTGGG
AAAACAGTGCAGCGTGGGCCAATGTCTGGAACACGGTCCAAATCATAATTCCATGGGGAA
GAGAGCCTGTCTACTCAGGCCTTGTTCTGAAGAGCATCAAAGTCAAAGCAGGAGAAACCC
AGCAAAGAATGACATTTTGCCCAGAAAACATGAATGATCTACAACTTCACCCAACCCAGG
AGAAAACCTTTGTGAGATGTGAAGCAAACTCTAAAAAATTGAAACGAAAGATCAGATGAG
CTTTCATGAAGACCCAATATGAAAATAAATGATTTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61815972|ref|XP_604990.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61815972|ref|XP_604990.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               209-427, gnl|bosTau2|chr10 (33729315-33729533)
               

               
               209-427, gnl|Hg17|chr15 (56642996-56643214)
               

               
               209-427, gnl|Mm7|chr9 (70834618-70834400)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               209-427, gnl|bosTau2|chr10 (33729315-33729533)
               

               
               209-427, gnl|Hg17|chr15 (56642996-56643214)
               

               
               209-427, gnl|Mm7|chr9 (70834618-70834400)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lun (0.300978)
               

               
               cli (0.152812)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.300978)
               

               
               cli (0.152812)

	209-427, gnl\|bosTau2\|chr10 (33729315-33729533)
	209-427, gnl\|Hg17\|chr15 (56642996-56643214)
	209-427, gnl\|Mm7\|chr9 (70834618-70834400)