Non-Coding RNA Search

Ss1.1-Pig3-SRG8024K23.3

Sequence:


               
               TTTTCATTTTGTTCCAAAATAGTTGCAGATCCTGACAGAATCAAAACTCTGCCTCAAAAC
ACACATCTTGGCGGGGGGCTGTTAGCATTTAACTTCTTGTCATGATTCAGGGAAGGTACC
ATTGGCCAAGGGTTTTTTGGTTTTTTTTTTCTTTTTTTTTCTTTTTAAACAAGCCAACCA
CCTATCTATAATTCAAGGGGTTCATTTAAAAAAAAAAATTCGGTGCACACAGACTGAAAT
GAAACCTGGGTGCTAAACTAAAAGAAAATAAAAGTCCAGTTTGTGTCTCTTAATTGCACT
CTTCCACTCATTTCTTCTAAATCAGCTATTGAATATCCTGGTCAGGAAATGGCATGTTAA
TGCTTTACTCCCTGAAGGGGAAAAAAAAAAATCTCTCCTTTAACCCACTATTCTGTTTTG
TGTCAACTGGTGTGGCAGGAAGCTATTAGAAGGCAAATTGCCAGATGCATGATTGCTATC
ATAGTTTAAAGAAAGGAAGACGAAAGGAAAAGAGAAATTCGACTCCTTGATTTTTTTTTT
TTCCCGTGTGAGTGATGAGGGCTGTGTTACAGGCGTGTCTCTTTGCTGAGACCATAGCCA
TGGGGTGAGATACCGGAAGCTCTTGGAGTCTGAAGCTTTTGCAACACTCTGGTCTCAACT
AAACATTTTGTTTTATCGGAACGTTGTTTTATTGAAAACTCGTGAAACGAAGCAGGTTGT
CCCACATGTATAAAATACAGGGCAGCTATTTAGTTTTCTTTACCAAGTATGATTCTTTTG
GCTTGGAAAAGGCCCTTTGGTCTGGACAAAAAACCCTCCATTAGAGACAAGCGAGGAAAG
GAAAAATAAGCTGAAAGCTAGGATGATAGAAATACAAACAGCTCTCTATCCCAATACGCA
CCTTTGTATTTTCAAGAACTCTTCTATTTATTAAGGAAAAATGTCACATTGTGATGTATT
AAGCCAGTACTTCAATTACGGGTTGACTTGGGATAACATGTTACATGCTGTAGTTAACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCATTTTGTTCCAAAATAGTTGCAGATCCTGACAGAATCAAAACTCTGCCTCAAAAC
ACACATCTTGGCGGGGGGCTGTTAGCATTTAACTTCTTGTCATGATTCAGGGAAGGTACC
ATTGGCCAAGGGTTTTTTGGTTTTTTTTTTCTTTTTTTTTCTTTTTAAACAAGCCAACCA
CCTATCTATAATTCAAGGGGTTCATTTAAAAAAAAAAATTCGGTGCACACAGACTGAAAT
GAAACCTGGGTGCTAAACTAAAAGAAAATAAAAGTCCAGTTTGTGTCTCTTAATTGCACT
CTTCCACTCATTTCTTCTAAATCAGCTATTGAATATCCTGGTCAGGAAATGGCATGTTAA
TGCTTTACTCCCTGAAGGGGAAAAAAAAAAATCTCTCCTTTAACCCACTATTCTGTTTTG
TGTCAACTGGTGTGGCAGGAAGCTATTAGAAGGCAAATTGCCAGATGCATGATTGCTATC
ATAGTTTAAAGAAAGGAAGACGAAAGGAAAAGAGAAATTCGACTCCTTGATTTTTTTTTT
TTCCCGTGTGAGTGATGAGGGCTGTGTTACAGGCGTGTCTCTTTGCTGAGACCATAGCCA
TGGGGTGAGATACCGGAAGCTCTTGGAGTCTGAAGCTTTTGCAACACTCTGGTCTCAACT
AAACATTTTGTTTTATCGGAACGTTGTTTTATTGAAAACTCGTGAAACGAAGCAGGTTGT
CCCACATGTATAAAATACAGGGCAGCTATTTAGTTTTCTTTACCAAGTATGATTCTTTTG
GCTTGGAAAAGGCCCTTTGGTCTGGACAAAAAACCCTCCATTAGAGACAAGCGAGGAAAG
GAAAAATAAGCTGAAAGCTAGGATGATAGAAATACAAACAGCTCTCTATCCCAATACGCA
CCTTTGTATTTTCAAGAACTCTTCTATTTATTAAGGAAAAATGTCACATTGTGATGTATT
AAGCCAGTACTTCAATTACGGGTTGACTTGGGATAACATGTTACATGCTGTAGTTAACAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-540, gnl|bosTau2|chr26 (31423468-31424003)
               

               
               1-540, gnl|Hg17|chr2 (12831809-12832321)
               

               
               1-540, gnl|Mm7|chr12 (15847737-15847228)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-540, gnl|bosTau2|chr26 (31423468-31424003)
               

               
               1-540, gnl|Hg17|chr2 (12831809-12832321)
               

               
               1-540, gnl|Mm7|chr12 (15847737-15847228)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               fty (0.17584)
               

               
               thg (0.126791)
               

               
               ebs (0.118301)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               thg (0.126791)
               

               
               ebs (0.118301)

	1-540, gnl\|bosTau2\|chr26 (31423468-31424003)
	1-540, gnl\|Hg17\|chr2 (12831809-12832321)
	1-540, gnl\|Mm7\|chr12 (15847737-15847228)