Ss1.1-Pig3-SRG8024N13.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATACCTCAGGAGAAGATGACATCAACATCAATGCCACCTGCTTAAAGGCTATATGTGACA AATCACTGGAAGTTCACCTTCAGGTGGATGCCATGTACACAAATGTCCGAGTGACCAACA TCTGCTCGGACGGCACACTCTACTGTCAGGTGCCTTGTAAGGGTCTCAGCAAGCTCAACG ACCTTCTGCATAAGATAGAGGACTACTTCCATTGCAAGCACATGACCTCCGAGTACTTCG TTTCATTACCCTTCTGTGGGAAAATCTGCCTCTTCCATTGCAAAGGAAAATGGTTACGAG TAGAGGTTACAAACCCAGCTGGTCTCCATGAGGATGTGGGTTCTGTCCGTGGCCTCACTC AGCAGATCACGAATGTTCACAGCAGCCGGGCTCTTGATGTTCAGTTTTTGGACTCTGGCA CTGTGACGTCTGTAAAAGTGTCCGAGCTCAGAGAGATTCCCCCTCGGTTTCTCCACGAAA TGATTGCAATACCACCTCAGGCTATAAAGTGCTGTTTAGCAGATCTTCCACAGTCTATTG GCATGTGGACACCAGATGCTGTGCTTTGGCTAAGAGATTCTGTTTTGAATTGCTCAGACT GTAGCATTAAGGTTACAAAAGTGGAGGAAACCAGAGGGATCACACATATTTATTTATTTA CCCCCAAGAACTTCCCCGATCCTCACCGCAGTATCAATCGCCAGATTACAAATGCAGACT TGTGGAAGCATCAGAAGGATGTGTTTCTGAGTGCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATACCTCAGGAGAAGATGACATCAACATCAATGCCACCTGCTTAAAGGCTATATGTGACA AATCACTGGAAGTTCACCTTCAGGTGGATGCCATGTACACAAATGTCCGAGTGACCAACA TCTGCTCGGACGGCACACTCTACTGTCAGGTGCCTTGTAAGGGTCTCAGCAAGCTCAACG ACCTTCTGCATAAGATAGAGGACTACTTCCATTGCAAGCACATGACCTCCGAGTACTTCG TTTCATTACCCTTCTGTGGGAAAATCTGCCTCTTCCATTGCAAAGGAAAATGGTTACGAG TAGAGGTTACAAACCCAGCTGGTCTCCATGAGGATGTGGGTTCTGTCCGTGGCCTCACTC AGCAGATCACGAATGTTCACAGCAGCCGGGCTCTTGATGTTCAGTTTTTGGACTCTGGCA CTGTGACGTCTGTAAAAGTGTCCGAGCTCAGAGAGATTCCCCCTCGGTTTCTCCACGAAA TGATTGCAATACCACCTCAGGCTATAAAGTGCTGTTTAGCAGATCTTCCACAGTCTATTG GCATGTGGACACCAGATGCTGTGCTTTGGCTAAGAGATTCTGTTTTGAATTGCTCAGACT GTAGCATTAAGGTTACAAAAGTGGAGGAAACCAGAGGGATCACACATATTTATTTATTTA CCCCCAAGAACTTCCCCGATCCTCACCGCAGTATCAATCGCCAGATTACAAATGCAGACT TGTGGAAGCATCAGAAGGATGTGTTTCTGAGTGCCG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
| 81-218, gnl|bosTau2|chr8 (32691509-32691646) | |
| 81-218, gnl|canFam2|chr11 (57838732-57838897) | |
| 81-218, gnl|danRer3|chr1 (7751356-7751198) | |
| 81-218, gnl|dasNov1|scaffold_6854 (50835-50683) | |
| 81-218, gnl|echTel1|scaffold_314194 (4708-4874) | |
| 81-218, gnl|fr1|chrUn (53820749-53820893) | |
| 81-218, gnl|galGal2|chrUn (126347651-126347811) | |
| 81-218, gnl|hg17|chr9 (97315313-97315478) | |
| 81-218, gnl|Hg17|chr9 (97315326-97315463) | |
| 81-218, gnl|loxAfr1|scaffold_211 (45521-45686) | |
| 81-218, gnl|mm7|chr4 (46030668-46030832) | |
| 81-218, gnl|Mm7|chr4 (46030680-46030817) | |
| 81-218, gnl|monDom2|scaffold_19 (12712365-12712519) | |
| 81-218, gnl|oryCun1|scaffold_201566 (54018-53862) | |
| 81-218, gnl|panTro1|chr11 (81532372-81532537) | |
| 81-218, gnl|rheMac2|chr15 (38748511-38748346) | |
| 81-218, gnl|rn3|chr5 (62556283-62556447) | |
| 81-218, gnl|tetNig1|chr18 (5266218-5266068) | |
| 81-218, gnl|xenTro1|scaffold_196 (224482-224637) | |
| 363-501, gnl|bosTau2|chr8 (32701789-32701927) | |
| 363-501, gnl|canFam2|chr11 (57847238-57847398) | |
| 363-501, gnl|danRer3|chr1 (7749874-7749703) | |
| 363-501, gnl|dasNov1|scaffold_6854 (46710-46555) | |
| 363-501, gnl|echTel1|scaffold_314194 (7650-7810) | |
| 363-501, gnl|fr1|chrUn (53822147-53822297) | |
| 363-501, gnl|galGal2|chrUn (126349643-126349796) | |
| 363-501, gnl|hg17|chr9 (97320255-97320415) | |
| 363-501, gnl|Hg17|chr9 (97320273-97320411) | |
| 363-501, gnl|mm7|chr4 (46034599-46034758) | |
| 363-501, gnl|Mm7|chr4 (46034616-46034754) | |
| 363-501, gnl|monDom2|scaffold_19 (12727672-12727832) | |
| 363-501, gnl|oryCun1|scaffold_201566 (48622-48460) | |
| 363-501, gnl|panTro1|chr11 (81537307-81537467) | |
| 363-501, gnl|rheMac2|chr15 (38743189-38743029) | |
| 363-501, gnl|rn3|chr5 (62560070-62560230) | |
| 363-501, gnl|tetNig1|chr18 (5265351-5265211) | |
| 363-501, gnl|xenTro1|scaffold_196 (225433-225596) | |
| 609-755, gnl|bosTau2|chr8 (32706560-32706706) | |
| 609-755, gnl|Hg17|chr9 (97324683-97324829) | |
| 609-755, gnl|Mm7|chr4 (46039468-46039614) |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 81-218, gnl|bosTau2|chr8 (32691509-32691646) | |
| 81-218, gnl|canFam2|chr11 (57838732-57838897) | |
| 81-218, gnl|danRer3|chr1 (7751356-7751198) | |
| 81-218, gnl|dasNov1|scaffold_6854 (50835-50683) | |
| 81-218, gnl|echTel1|scaffold_314194 (4708-4874) | |
| 81-218, gnl|fr1|chrUn (53820749-53820893) | |
| 81-218, gnl|galGal2|chrUn (126347651-126347811) | |
| 81-218, gnl|hg17|chr9 (97315313-97315478) | |
| 81-218, gnl|Hg17|chr9 (97315326-97315463) | |
| 81-218, gnl|loxAfr1|scaffold_211 (45521-45686) | |
| 81-218, gnl|mm7|chr4 (46030668-46030832) | |
| 81-218, gnl|Mm7|chr4 (46030680-46030817) | |
| 81-218, gnl|monDom2|scaffold_19 (12712365-12712519) | |
| 81-218, gnl|oryCun1|scaffold_201566 (54018-53862) | |
| 81-218, gnl|panTro1|chr11 (81532372-81532537) | |
| 81-218, gnl|rheMac2|chr15 (38748511-38748346) | |
| 81-218, gnl|rn3|chr5 (62556283-62556447) | |
| 81-218, gnl|tetNig1|chr18 (5266218-5266068) | |
| 81-218, gnl|xenTro1|scaffold_196 (224482-224637) | |
| 363-501, gnl|bosTau2|chr8 (32701789-32701927) | |
| 363-501, gnl|canFam2|chr11 (57847238-57847398) | |
| 363-501, gnl|danRer3|chr1 (7749874-7749703) | |
| 363-501, gnl|dasNov1|scaffold_6854 (46710-46555) | |
| 363-501, gnl|echTel1|scaffold_314194 (7650-7810) | |
| 363-501, gnl|fr1|chrUn (53822147-53822297) | |
| 363-501, gnl|galGal2|chrUn (126349643-126349796) | |
| 363-501, gnl|hg17|chr9 (97320255-97320415) | |
| 363-501, gnl|Hg17|chr9 (97320273-97320411) | |
| 363-501, gnl|mm7|chr4 (46034599-46034758) | |
| 363-501, gnl|Mm7|chr4 (46034616-46034754) | |
| 363-501, gnl|monDom2|scaffold_19 (12727672-12727832) | |
| 363-501, gnl|oryCun1|scaffold_201566 (48622-48460) | |
| 363-501, gnl|panTro1|chr11 (81537307-81537467) | |
| 363-501, gnl|rheMac2|chr15 (38743189-38743029) | |
| 363-501, gnl|rn3|chr5 (62560070-62560230) | |
| 363-501, gnl|tetNig1|chr18 (5265351-5265211) | |
| 363-501, gnl|xenTro1|scaffold_196 (225433-225596) | |
| 609-755, gnl|bosTau2|chr8 (32706560-32706706) | |
| 609-755, gnl|Hg17|chr9 (97324683-97324829) | |
| 609-755, gnl|Mm7|chr4 (46039468-46039614) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ste (0.135208) |