Non-Coding RNA Search

Ss1.1-Pig3-SRG8024N18.3

Sequence:


               
               AATATTTGTTGAAATTCTTTTAATTTGGTTATCTTGCTTCACAAATTATGCCTCTAAACA
ACTAGTTTATTTTTTAAATAGTCTGACTGATGTCAAGAAATATACTTACTGCTCTCAGTA
TATGGTGGGTTAGCAGTTTGTTAAATCAGCAAAAAGGTATAAAGATATCAGTTTAATTCT
TTGATAATTTAATCTATGTTGTATGTAAATTATTTATTATAAATTTAACATGATTCTGTG
ATTGCGCTTATCCATTTCATCTGTTTGTTGAGTGTAAGCAATGAAAATTTTCCAGAGAAA
TTTTTTTTAAAGTTTTACTTTAATAAGATTAATTTTAGTAAACATTTTGGATGTTTAGTG
TAACCCTTTTATTTTGACACACTAAGTAAAATGAATCATTTACTCTTGTAATGCCAGACA
TTGGTTTAGATAACTTAGAATATTCATAGAAAAATATCTGTTTAGGAGAGTGAAATAAAT
TCATGGTCTGTGCTAGTGGTACATCTTTTTGAAGTATTGGAAAACTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATATTTGTTGAAATTCTTTTAATTTGGTTATCTTGCTTCACAAATTATGCCTCTAAACA
ACTAGTTTATTTTTTAAATAGTCTGACTGATGTCAAGAAATATACTTACTGCTCTCAGTA
TATGGTGGGTTAGCAGTTTGTTAAATCAGCAAAAAGGTATAAAGATATCAGTTTAATTCT
TTGATAATTTAATCTATGTTGTATGTAAATTATTTATTATAAATTTAACATGATTCTGTG
ATTGCGCTTATCCATTTCATCTGTTTGTTGAGTGTAAGCAATGAAAATTTTCCAGAGAAA
TTTTTTTTAAAGTTTTACTTTAATAAGATTAATTTTAGTAAACATTTTGGATGTTTAGTG
TAACCCTTTTATTTTGACACACTAAGTAAAATGAATCATTTACTCTTGTAATGCCAGACA
TTGGTTTAGATAACTTAGAATATTCATAGAAAAATATCTGTTTAGGAGAGTGAAATAAAT
TCATGGTCTGTGCTAGTGGTACATCTTTTTGAAGTATTGGAAAACTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-528, gnl|bosTau2|chr5 (50136843-50136317)
               

               
               1-528, gnl|Hg17|chr12 (22729228-22729765)
               

               
               1-528, gnl|Mm7|chr6 (143294345-143294838)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-528, gnl|bosTau2|chr5 (50136843-50136317)
               

               
               1-528, gnl|Hg17|chr12 (22729228-22729765)
               

               
               1-528, gnl|Mm7|chr6 (143294345-143294838)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbl (0.229595)
               

               
               nco (0.161734)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)
               

               
               nco (0.161734)

	1-528, gnl\|bosTau2\|chr5 (50136843-50136317)
	1-528, gnl\|Hg17\|chr12 (22729228-22729765)
	1-528, gnl\|Mm7\|chr6 (143294345-143294838)