Ss1.1-Pig3-SRG8024P20.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCCAAATATGAGTCTAATGCCACGACTGATGAGCACGGCCTGGTGCAATTCTCCATCAA CACCACCGAGATCATGGGCACCTCGCTCACTATCAGGGTCAAACACAAAGATCACAGTCC CTGTTACGGCTACCAGTGGGTCTCAGAAGAACATGAAGAAGCGTATCACACTGCGAATCT CGTATTCTCCCAAAGCAAGAGCTTTGTCCACTTAGAGCCGGTGCCTCAAGAATTGCCCTG TGGCCAAACTCAGACAGTCCAAGCACATTATGTACTGAATGGCCAGATCCTGCGGGAGCT GAAGGAGCTCGTGTTCTATTACCTGATAATGTCAAAGGGAGGCATTGTCCGAGCTGGGAC TCATACACTGCCCGTGGAGCAGGGAGACATGAAAGGCTCTTTTTCCTTGTCATTCCCCGT GGAGGCAGACCTCGCTCCCATCGCTCGGCTGCTCATCTATGCCATTTTACCCGACGGGGA AGTGGTTGGGGATTCTGCAAAATATGAGGTTGAAAACTGTCTGCCCAACAAGGTGGGTTT GCACTTCAACCCAGCACAAGGTCTCCCGGGGTCCCACGCCCACCTGCAAGTCACCGCTTC CCCTAAGTCCCTCTGCGGCCTCCGCGCTGTGGACCAGAGTGTGCTGCTCCTGAAACCCGA GGCCGAGCTTTCCCCCACCACGGTTTATAACCTGCTACCAGTAAAGGACCTCAACAGTTT CCCTGAGAGTTTAAATCAACAGGAGGAAGATAATGAAGATTGCATCAGTCAACATAATGT CTATATCAATGGGATCATGTATTCCCCAGTATCAAATACGAATGAAAAAGATGTCTATAG CTTCCTACAGGATATGGGCTTAAGGGTATTTACCAACACCAAGATTCATAAACCCAAAAT ATGTTCACCACTTCCATTATATGAAATGCAGACATCTCGAAGGCTACTAGCTTCTCCAGC CTTAGCGGAAATGGATAGAGGAGGCCATGCCCTCATGAACATGGTACGCATATCAGAGCC TCTCGCCACGGAGACTGTGCGCAAGTACTTCCCTGAGACGTGGATCTGGGAGTTGGTGCC CGTAAACGACTCGGGTGTGGCTGAAATAGAAGTGACCATCCCCGATACCATCACTGAGTG GAAAGCAGGGGCCCTCTGCCTGGCCAGTGACATTGGACTTGGTCTCTCTCCGACTGCCTC TCTCCAAGCCTTCCAGCCATTCTTTGTGGAGCTCACAATGCCCTACTCAGTGATCCGTGG AGAGGGCTTCACGCTCAAGGCCACTGTGTTCAACTACCTTCCCAAATGCATCCGGGTCAG TGTGCACCTGATGGACTCTCCTGCATTCCTAGCTGTCCCAGAAGAGAAGGAAGAAAAGGC CCACTGCATCTGTGGGAATGGCCGGCAAACTGTGTCCTGGGCAGTAACCCCAAAATCATT AGAGAAGGTGAATTTCACAGTGACTGCAGAGGCACTGTCGTCTCAAGAGCTGTGTGGGAC TGAGGCGGCTATGGTCCCCGAATATGGAAGGAAGGACACAATCATCAAGTCCCTGTTGGT TGAACCTGAAGGACTAGAGAAGGAAGTAACATTCAACTCCCTGCTTTGTCCATCAGATGC TGGGGCGTCTGAACAATTATCTCTGAAGCTACCCCCAAATGTGGTAGAAGACTCTGCTCG TGCCTTCTTCTCAGTTTTGGGAGACTTATTAGGCTCTGCCATGAGAAACACACAAAACCT CCTCCAAATGCCCTACGGCTGTGGAGAACAGAATATGGTCCTCTTTGCTCCTAACATCTA TGTTCTGGATTACCTGAATGAAACACAGCAGCTGACTGCAGAGATCAAGTCCAAGGCCAT TCGCTACCTCAACACCGGTTACCAGAGACAGCTTCTCTACAAGCACTACGATGGCTCCTA TAGCACCTTTGGGGAGCACTATGGCAGAAGTGAGGGCAATACCTGGCTCACAGCCTTTGT AATGAAGACTTTTGCCCAGGCTCGAACCTACATCTTCATTGATGAAACGCATATTACCGA AGCCCTCACCTGGCTCTCCCAAAAGCAGAAGGACAATGGCTGTTTCAGGAGTTCTGGGTC ACTGCTCAACAATGCCATTAAGGGTGGAGTGGACGATGAAGTAACCCTCTCTGCCTATGT CACCATTGCACTTCTGGAGATTCCTCTCGCTGTCACTCACCCTGTCGTCCGCAGTGCCCT GTTCTGCCTGGAGACAGCCTGGAAGTCAGCCCAGGAGGGATCCCAAGGTAGCCATGTCTA CACCAAGGCACTGCTGGCCTACGCCTTTGCCCTGGCGGGTAACCAGGAAAAGAAGAAAGA AGTGCTCCAGTCACTAGATGCGGAAGCCGTGAAGGAAGGTGATTCCATCCACTGGACACG ACCTCAGAAACCCGAGGCACCAGTGCAGCATTTTTACAAACCCCGGGCGCCCTCAGCTGA GGTGGAGATGACGGCCTACGTGCTCCTCACCTGCCTCACAGCCCAGTCCGCCCTGAGCTC GGAGGACCTGAACCTCGCTACGCTCATCATGAAGTGGATCACAAAGCAGCAGAATTCCCA AGGGGGCTTCTCCTCCACGCAGGACACAGTGGTGGCTCTCCATGCTTTGTCCAAATACGG AGCAGCCACTTTCACCAGGACCGGGAAGGCTGCAGAGGTGACCATCCAATCCACAGGGAC ATTCTCCAAAAAATTCCAAGTGAACAACGACAACCTCCTGTTACTACAGCAGATATCATT GCCAGCAGTGCCTGGAGAATACAGCATAACAGCAACAGGAAAAGGATGTGTTTACCTCCA GACATCTCTGAAGTACAATATTCTCCCGAAAAAGGAAGACTTCCCATTTGCTTTGGAGGT GCAGACTCTGCCGCCAACATGTGAACCCAAAGTCCACACCAGCTTCCAGATCTCAGTGAA CGTCAGTTACACCGGCAGCCGTCCAGCCTCCAACATGGCGATTGTTGATGTAAAGATGGT ATCTGGCTTCATTCCTTTGAAACCAACAGTGAAAATGCTTGAAAGATCTGACAACGTGAG CCGAACAGAGGTCAGCAGCAACCATGTTTTGATTTACCTGGATAAGGTGACAGATCGGTC CCTGAGCATGTCCTTCACGGTTACACAGGACATCCCAGTAAGAGATCTGAAACCAGCCAT AGTGAAAGTCTATGACTATTATGAGACAGCTGAGTTTGCCATCGCTGAGTACAACGCTCC TTGCAGCAAAGATCCCGGAAATGTTTAAAGGCCACATCCATAAAAACTGCTTTGCTGGAG TCCCTGTTCCACAGCTTCAGTTCTCCATATTAGAAAAGAGTGTATCTCTGAAAGCTTAAT AAATAAACCTTTTTTTTTTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAATTCAATAAACA TTTATTATACTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCCAAATATGAGTCTAATGCCACGACTGATGAGCACGGCCTGGTGCAATTCTCCATCAA CACCACCGAGATCATGGGCACCTCGCTCACTATCAGGGTCAAACACAAAGATCACAGTCC CTGTTACGGCTACCAGTGGGTCTCAGAAGAACATGAAGAAGCGTATCACACTGCGAATCT CGTATTCTCCCAAAGCAAGAGCTTTGTCCACTTAGAGCCGGTGCCTCAAGAATTGCCCTG TGGCCAAACTCAGACAGTCCAAGCACATTATGTACTGAATGGCCAGATCCTGCGGGAGCT GAAGGAGCTCGTGTTCTATTACCTGATAATGTCAAAGGGAGGCATTGTCCGAGCTGGGAC TCATACACTGCCCGTGGAGCAGGGAGACATGAAAGGCTCTTTTTCCTTGTCATTCCCCGT GGAGGCAGACCTCGCTCCCATCGCTCGGCTGCTCATCTATGCCATTTTACCCGACGGGGA AGTGGTTGGGGATTCTGCAAAATATGAGGTTGAAAACTGTCTGCCCAACAAGGTGGGTTT GCACTTCAACCCAGCACAAGGTCTCCCGGGGTCCCACGCCCACCTGCAAGTCACCGCTTC CCCTAAGTCCCTCTGCGGCCTCCGCGCTGTGGACCAGAGTGTGCTGCTCCTGAAACCCGA GGCCGAGCTTTCCCCCACCACGGTTTATAACCTGCTACCAGTAAAGGACCTCAACAGTTT CCCTGAGAGTTTAAATCAACAGGAGGAAGATAATGAAGATTGCATCAGTCAACATAATGT CTATATCAATGGGATCATGTATTCCCCAGTATCAAATACGAATGAAAAAGATGTCTATAG CTTCCTACAGGATATGGGCTTAAGGGTATTTACCAACACCAAGATTCATAAACCCAAAAT ATGTTCACCACTTCCATTATATGAAATGCAGACATCTCGAAGGCTACTAGCTTCTCCAGC CTTAGCGGAAATGGATAGAGGAGGCCATGCCCTCATGAACATGGTACGCATATCAGAGCC TCTCGCCACGGAGACTGTGCGCAAGTACTTCCCTGAGACGTGGATCTGGGAGTTGGTGCC CGTAAACGACTCGGGTGTGGCTGAAATAGAAGTGACCATCCCCGATACCATCACTGAGTG GAAAGCAGGGGCCCTCTGCCTGGCCAGTGACATTGGACTTGGTCTCTCTCCGACTGCCTC TCTCCAAGCCTTCCAGCCATTCTTTGTGGAGCTCACAATGCCCTACTCAGTGATCCGTGG AGAGGGCTTCACGCTCAAGGCCACTGTGTTCAACTACCTTCCCAAATGCATCCGGGTCAG TGTGCACCTGATGGACTCTCCTGCATTCCTAGCTGTCCCAGAAGAGAAGGAAGAAAAGGC CCACTGCATCTGTGGGAATGGCCGGCAAACTGTGTCCTGGGCAGTAACCCCAAAATCATT AGAGAAGGTGAATTTCACAGTGACTGCAGAGGCACTGTCGTCTCAAGAGCTGTGTGGGAC TGAGGCGGCTATGGTCCCCGAATATGGAAGGAAGGACACAATCATCAAGTCCCTGTTGGT TGAACCTGAAGGACTAGAGAAGGAAGTAACATTCAACTCCCTGCTTTGTCCATCAGATGC TGGGGCGTCTGAACAATTATCTCTGAAGCTACCCCCAAATGTGGTAGAAGACTCTGCTCG TGCCTTCTTCTCAGTTTTGGGAGACTTATTAGGCTCTGCCATGAGAAACACACAAAACCT CCTCCAAATGCCCTACGGCTGTGGAGAACAGAATATGGTCCTCTTTGCTCCTAACATCTA TGTTCTGGATTACCTGAATGAAACACAGCAGCTGACTGCAGAGATCAAGTCCAAGGCCAT TCGCTACCTCAACACCGGTTACCAGAGACAGCTTCTCTACAAGCACTACGATGGCTCCTA TAGCACCTTTGGGGAGCACTATGGCAGAAGTGAGGGCAATACCTGGCTCACAGCCTTTGT AATGAAGACTTTTGCCCAGGCTCGAACCTACATCTTCATTGATGAAACGCATATTACCGA AGCCCTCACCTGGCTCTCCCAAAAGCAGAAGGACAATGGCTGTTTCAGGAGTTCTGGGTC ACTGCTCAACAATGCCATTAAGGGTGGAGTGGACGATGAAGTAACCCTCTCTGCCTATGT CACCATTGCACTTCTGGAGATTCCTCTCGCTGTCACTCACCCTGTCGTCCGCAGTGCCCT GTTCTGCCTGGAGACAGCCTGGAAGTCAGCCCAGGAGGGATCCCAAGGTAGCCATGTCTA CACCAAGGCACTGCTGGCCTACGCCTTTGCCCTGGCGGGTAACCAGGAAAAGAAGAAAGA AGTGCTCCAGTCACTAGATGCGGAAGCCGTGAAGGAAGGTGATTCCATCCACTGGACACG ACCTCAGAAACCCGAGGCACCAGTGCAGCATTTTTACAAACCCCGGGCGCCCTCAGCTGA GGTGGAGATGACGGCCTACGTGCTCCTCACCTGCCTCACAGCCCAGTCCGCCCTGAGCTC GGAGGACCTGAACCTCGCTACGCTCATCATGAAGTGGATCACAAAGCAGCAGAATTCCCA AGGGGGCTTCTCCTCCACGCAGGACACAGTGGTGGCTCTCCATGCTTTGTCCAAATACGG AGCAGCCACTTTCACCAGGACCGGGAAGGCTGCAGAGGTGACCATCCAATCCACAGGGAC ATTCTCCAAAAAATTCCAAGTGAACAACGACAACCTCCTGTTACTACAGCAGATATCATT GCCAGCAGTGCCTGGAGAATACAGCATAACAGCAACAGGAAAAGGATGTGTTTACCTCCA GACATCTCTGAAGTACAATATTCTCCCGAAAAAGGAAGACTTCCCATTTGCTTTGGAGGT GCAGACTCTGCCGCCAACATGTGAACCCAAAGTCCACACCAGCTTCCAGATCTCAGTGAA CGTCAGTTACACCGGCAGCCGTCCAGCCTCCAACATGGCGATTGTTGATGTAAAGATGGT ATCTGGCTTCATTCCTTTGAAACCAACAGTGAAAATGCTTGAAAGATCTGACAACGTGAG CCGAACAGAGGTCAGCAGCAACCATGTTTTGATTTACCTGGATAAGGTGACAGATCGGTC CCTGAGCATGTCCTTCACGGTTACACAGGACATCCCAGTAAGAGATCTGAAACCAGCCAT AGTGAAAGTCTATGACTATTATGAGACAGCTGAGTTTGCCATCGCTGAGTACAACGCTCC TTGCAGCAAAGATCCCGGAAATGTTTAAAGGCCACATCCATAAAAACTGCTTTGCTGGAG TCCCTGTTCCACAGCTTCAGTTCTCCATATTAGAAAAGAGTGTATCTCTGAAAGCTTAAT AAATAAACCTTTTTTTTTTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAATTCAATAAACA TTTATTATACTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 6 entry(ies) | More info |
| Predicted RNA structure(s): 6 entry(ies) | Help | Less info |
| Predicted RNA structure(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of BC040071, - |
| Aligned organism(s): 128 entry(ies) | More info |
| Aligned organism(s): 128 entry(ies) | Help | Less info |
| 92-325, gnl|bosTau2|chr5 (61061243-61061475) | |
| 92-325, gnl|canFam2|chr27 (39694518-39694266) | |
| 92-325, gnl|dasNov1|scaffold_15693 (91230-90979) | |
| 92-325, gnl|echTel1|scaffold_287701 (30590-30339) | |
| 92-325, gnl|galGal2|chrUn (104478924-104479175) | |
| 92-325, gnl|hg17|chr12 (9145304-9145555) | |
| 92-325, gnl|Hg17|chr12 (9145542-9145310) | |
| 92-325, gnl|loxAfr1|scaffold_420 (149120-149403) | |
| 92-325, gnl|mm7|chr6 (121673000-121672749) | |
| 92-325, gnl|Mm7|chr6 (121672760-121672992) | |
| 92-325, gnl|monDom2|scaffold_31 (11727935-11727680) | |
| 92-325, gnl|oryCun1|scaffold_214581 (36819-36568) | |
| 92-325, gnl|panTro1|chrUn_random (57955206-57954955) | |
| 92-325, gnl|rheMac2|chr11 (9242785-9243036) | |
| 92-325, gnl|rn3|chr4 (158361023-158360772) | |
| 92-325, gnl|xenTro1|scaffold_365 (274050-274285) | |
| 390-538, gnl|bosTau2|chr5 (61063890-61064038) | |
| 390-538, gnl|Hg17|chr12 (9143386-9143238) | |
| 390-538, gnl|Mm7|chr6 (121674583-121674731) | |
| 682-851, gnl|bosTau2|chr5 (61067501-61067670) | |
| 682-851, gnl|Hg17|chr12 (9139564-9139401) | |
| 682-851, gnl|Mm7|chr6 (121683637-121683806) | |
| 1090-1320, gnl|bosTau2|chr5 (61128688-61128923) | |
| 1090-1320, gnl|Hg17|chr12 (9135289-9135059) | |
| 1090-1320, gnl|Mm7|chr6 (121800901-121801131) | |
| 1091-1317, gnl|bosTau2|chr5 (61071696-61071922) | |
| 1091-1317, gnl|canFam2|chr27 (39703168-39702925) | |
| 1091-1317, gnl|danRer3|chr15 (24959549-24959766) | |
| 1091-1317, gnl|dasNov1|scaffold_14507 (45599-45842) | |
| 1091-1317, gnl|echTel1|scaffold_287701 (42063-41820) | |
| 1091-1317, gnl|fr1|chrUn (304145006-304145250) | |
| 1091-1317, gnl|galGal2|chrUn (104472032-104472275) | |
| 1091-1317, gnl|hg17|chr12 (9135058-9135301) | |
| 1091-1317, gnl|Hg17|chr12 (9135288-9135062) | |
| 1091-1317, gnl|loxAfr1|scaffold_420 (135897-136140) | |
| 1091-1317, gnl|mm7|chr6 (121686414-121686171) | |
| 1091-1317, gnl|Mm7|chr6 (121686182-121686408) | |
| 1091-1317, gnl|monDom2|scaffold_31 (11753663-11753420) | |
| 1091-1317, gnl|oryCun1|scaffold_214581 (49745-49502) | |
| 1091-1317, gnl|panTro1|chrUn_random (57965643-57965400) | |
| 1091-1317, gnl|rheMac2|chr11 (9231893-9232136) | |
| 1091-1317, gnl|rn3|chr4 (158372153-158371910) | |
| 1091-1317, gnl|tetNig1|chr16 (8121709-8121911) | |
| 1091-1317, gnl|xenTro1|scaffold_337 (542571-542331) | |
| 1440-1564, gnl|bosTau2|chr5 (61073181-61073305) | |
| 1440-1564, gnl|canFam2|chr27 (39704909-39704745) | |
| 1440-1564, gnl|danRer3|chr15 (24959148-24959300) | |
| 1440-1564, gnl|dasNov1|scaffold_10192 (61105-60946) | |
| 1440-1564, gnl|echTel1|scaffold_287701 (43683-43490) | |
| 1440-1564, gnl|fr1|chrUn (125214573-125214418) | |
| 1440-1564, gnl|galGal2|chr1 (40295877-40296011) | |
| 1440-1564, gnl|hg17|chr12 (9133754-9133920) | |
| 1440-1564, gnl|Hg17|chr12 (9133889-9133765) | |
| 1440-1564, gnl|loxAfr1|scaffold_163248 (1389-1226) | |
| 1440-1564, gnl|mm7|chr6 (121687819-121687649) | |
| 1440-1564, gnl|Mm7|chr6 (121687682-121687806) | |
| 1440-1564, gnl|monDom2|scaffold_31 (11758874-11758711) | |
| 1440-1564, gnl|oryCun1|scaffold_214581 (51348-51177) | |
| 1440-1564, gnl|panTro1|chrUn_random (57966949-57966782) | |
| 1440-1564, gnl|rheMac2|chr11 (9230598-9230770) | |
| 1440-1564, gnl|rn3|chr4 (158373547-158373380) | |
| 1440-1564, gnl|xenTro1|scaffold_365 (384405-384240) | |
| 1683-1879, gnl|bosTau2|chr5 (61078438-61078636) | |
| 1683-1879, gnl|canFam2|chr27 (39709755-39709564) | |
| 1683-1879, gnl|danRer3|chr15 (24958018-24958206) | |
| 1683-1879, gnl|dasNov1|scaffold_10192 (63886-63697) | |
| 1683-1879, gnl|echTel1|scaffold_287013 (5422-5613) | |
| 1683-1879, gnl|fr1|chrUn (304144021-304144212) | |
| 1683-1879, gnl|galGal2|chrUn (104533937-104534128) | |
| 1683-1879, gnl|hg17|chr12 (9123495-9123686) | |
| 1683-1879, gnl|Hg17|chr12 (9123698-9123500) | |
| 1683-1879, gnl|loxAfr1|scaffold_70747 (606-420) | |
| 1683-1879, gnl|mm7|chr6 (121694488-121694298) | |
| 1683-1879, gnl|Mm7|chr6 (121694284-121694482) | |
| 1683-1879, gnl|monDom2|scaffold_31 (11768852-11768663) | |
| 1683-1879, gnl|oryCun1|scaffold_214581 (56260-56069) | |
| 1683-1879, gnl|panTro1|chrUn_random (57977252-57977061) | |
| 1683-1879, gnl|rheMac2|chr11 (9223002-9223193) | |
| 1683-1879, gnl|rn3|chr4 (158385648-158385458) | |
| 1683-1879, gnl|tetNig1|chr16 (8120230-8120419) | |
| 1683-1879, gnl|xenTro1|scaffold_337 (595648-595463) | |
| 1965-2131, gnl|bosTau2|chr5 (61080208-61080373) | |
| 1965-2131, gnl|canFam2|chr27 (39711914-39711727) | |
| 1965-2131, gnl|danRer3|chr15 (24957576-24957747) | |
| 1965-2131, gnl|dasNov1|scaffold_32968 (12186-12373) | |
| 1965-2131, gnl|echTel1|scaffold_287013 (4042-4225) | |
| 1965-2131, gnl|fr1|chrUn (304143632-304143796) | |
| 1965-2131, gnl|galGal2|chrUn (104532792-104532976) | |
| 1965-2131, gnl|hg17|chr12 (9121548-9121734) | |
| 1965-2131, gnl|Hg17|chr12 (9121721-9121556) | |
| 1965-2131, gnl|loxAfr1|scaffold_420 (128358-128545) | |
| 1965-2131, gnl|mm7|chr6 (121695943-121695758) | |
| 1965-2131, gnl|Mm7|chr6 (121695769-121695933) | |
| 1965-2131, gnl|monDom2|scaffold_31 (11771959-11771771) | |
| 1965-2131, gnl|oryCun1|scaffold_214581 (57579-57393) | |
| 1965-2131, gnl|panTro1|chrUn_random (57979197-57979011) | |
| 1965-2131, gnl|rheMac2|chr11 (9221037-9221223) | |
| 1965-2131, gnl|rn3|chr4 (158386967-158386782) | |
| 1965-2131, gnl|tetNig1|chr16 (8119601-8119772) | |
| 1965-2131, gnl|xenTro1|scaffold_337 (597363-597184) | |
| 2185-2382, gnl|bosTau2|chr5 (61081721-61081918) | |
| 2185-2382, gnl|Hg17|chr12 (9120812-9120615) | |
| 2185-2382, gnl|Mm7|chr6 (121697147-121697344) | |
| 2600-2821, gnl|bosTau2|chr5 (61088366-61088587) | |
| 2600-2821, gnl|canFam2|chr27 (39717051-39716797) | |
| 2600-2821, gnl|danRer3|chr15 (24956050-24956286) | |
| 2600-2821, gnl|dasNov1|scaffold_32968 (6827-7081) | |
| 2600-2821, gnl|echTel1|scaffold_287701 (66458-66204) | |
| 2600-2821, gnl|fr1|chrUn (304142699-304142916) | |
| 2600-2821, gnl|galGal2|chrUn (104528761-104529013) | |
| 2600-2821, gnl|hg17|chr12 (9116507-9116765) | |
| 2600-2821, gnl|Hg17|chr12 (9116737-9116516) | |
| 2600-2821, gnl|loxAfr1|scaffold_129943 (2573-2827) | |
| 2600-2821, gnl|mm7|chr6 (121701216-121700966) | |
| 2600-2821, gnl|Mm7|chr6 (121700986-121701207) | |
| 2600-2821, gnl|monDom2|scaffold_31 (11778516-11778262) | |
| 2600-2821, gnl|oryCun1|scaffold_155197 (9207-8958) | |
| 2600-2821, gnl|panTro1|chrUn_random (57984232-57983974) | |
| 2600-2821, gnl|rheMac2|chr11 (9215694-9215952) | |
| 2600-2821, gnl|rn3|chr4 (158394181-158393938) | |
| 2600-2821, gnl|tetNig1|chr16 (8118637-8118857) | |
| 2600-2821, gnl|xenTro1|scaffold_337 (600523-600288) | |
| 3105-3215, gnl|bosTau2|chr5 (61092888-61092998) | |
| 3105-3215, gnl|Hg17|chr12 (9112707-9112597) | |
| 3105-3215, gnl|Mm7|chr6 (121704238-121704348) | |
| 3247-3379, gnl|bosTau2|chr5 (61093850-61093988) | |
| 3247-3379, gnl|Hg17|chr12 (9111707-9111583) | |
| 3247-3379, gnl|Mm7|chr6 (121705345-121705473) |
| Aligned organism(s): 128 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 92-325, gnl|bosTau2|chr5 (61061243-61061475) | |
| 92-325, gnl|canFam2|chr27 (39694518-39694266) | |
| 92-325, gnl|dasNov1|scaffold_15693 (91230-90979) | |
| 92-325, gnl|echTel1|scaffold_287701 (30590-30339) | |
| 92-325, gnl|galGal2|chrUn (104478924-104479175) | |
| 92-325, gnl|hg17|chr12 (9145304-9145555) | |
| 92-325, gnl|Hg17|chr12 (9145542-9145310) | |
| 92-325, gnl|loxAfr1|scaffold_420 (149120-149403) | |
| 92-325, gnl|mm7|chr6 (121673000-121672749) | |
| 92-325, gnl|Mm7|chr6 (121672760-121672992) | |
| 92-325, gnl|monDom2|scaffold_31 (11727935-11727680) | |
| 92-325, gnl|oryCun1|scaffold_214581 (36819-36568) | |
| 92-325, gnl|panTro1|chrUn_random (57955206-57954955) | |
| 92-325, gnl|rheMac2|chr11 (9242785-9243036) | |
| 92-325, gnl|rn3|chr4 (158361023-158360772) | |
| 92-325, gnl|xenTro1|scaffold_365 (274050-274285) | |
| 390-538, gnl|bosTau2|chr5 (61063890-61064038) | |
| 390-538, gnl|Hg17|chr12 (9143386-9143238) | |
| 390-538, gnl|Mm7|chr6 (121674583-121674731) | |
| 682-851, gnl|bosTau2|chr5 (61067501-61067670) | |
| 682-851, gnl|Hg17|chr12 (9139564-9139401) | |
| 682-851, gnl|Mm7|chr6 (121683637-121683806) | |
| 1090-1320, gnl|bosTau2|chr5 (61128688-61128923) | |
| 1090-1320, gnl|Hg17|chr12 (9135289-9135059) | |
| 1090-1320, gnl|Mm7|chr6 (121800901-121801131) | |
| 1091-1317, gnl|bosTau2|chr5 (61071696-61071922) | |
| 1091-1317, gnl|canFam2|chr27 (39703168-39702925) | |
| 1091-1317, gnl|danRer3|chr15 (24959549-24959766) | |
| 1091-1317, gnl|dasNov1|scaffold_14507 (45599-45842) | |
| 1091-1317, gnl|echTel1|scaffold_287701 (42063-41820) | |
| 1091-1317, gnl|fr1|chrUn (304145006-304145250) | |
| 1091-1317, gnl|galGal2|chrUn (104472032-104472275) | |
| 1091-1317, gnl|hg17|chr12 (9135058-9135301) | |
| 1091-1317, gnl|Hg17|chr12 (9135288-9135062) | |
| 1091-1317, gnl|loxAfr1|scaffold_420 (135897-136140) | |
| 1091-1317, gnl|mm7|chr6 (121686414-121686171) | |
| 1091-1317, gnl|Mm7|chr6 (121686182-121686408) | |
| 1091-1317, gnl|monDom2|scaffold_31 (11753663-11753420) | |
| 1091-1317, gnl|oryCun1|scaffold_214581 (49745-49502) | |
| 1091-1317, gnl|panTro1|chrUn_random (57965643-57965400) | |
| 1091-1317, gnl|rheMac2|chr11 (9231893-9232136) | |
| 1091-1317, gnl|rn3|chr4 (158372153-158371910) | |
| 1091-1317, gnl|tetNig1|chr16 (8121709-8121911) | |
| 1091-1317, gnl|xenTro1|scaffold_337 (542571-542331) | |
| 1440-1564, gnl|bosTau2|chr5 (61073181-61073305) | |
| 1440-1564, gnl|canFam2|chr27 (39704909-39704745) | |
| 1440-1564, gnl|danRer3|chr15 (24959148-24959300) | |
| 1440-1564, gnl|dasNov1|scaffold_10192 (61105-60946) | |
| 1440-1564, gnl|echTel1|scaffold_287701 (43683-43490) | |
| 1440-1564, gnl|fr1|chrUn (125214573-125214418) | |
| 1440-1564, gnl|galGal2|chr1 (40295877-40296011) | |
| 1440-1564, gnl|hg17|chr12 (9133754-9133920) | |
| 1440-1564, gnl|Hg17|chr12 (9133889-9133765) | |
| 1440-1564, gnl|loxAfr1|scaffold_163248 (1389-1226) | |
| 1440-1564, gnl|mm7|chr6 (121687819-121687649) | |
| 1440-1564, gnl|Mm7|chr6 (121687682-121687806) | |
| 1440-1564, gnl|monDom2|scaffold_31 (11758874-11758711) | |
| 1440-1564, gnl|oryCun1|scaffold_214581 (51348-51177) | |
| 1440-1564, gnl|panTro1|chrUn_random (57966949-57966782) | |
| 1440-1564, gnl|rheMac2|chr11 (9230598-9230770) | |
| 1440-1564, gnl|rn3|chr4 (158373547-158373380) | |
| 1440-1564, gnl|xenTro1|scaffold_365 (384405-384240) | |
| 1683-1879, gnl|bosTau2|chr5 (61078438-61078636) | |
| 1683-1879, gnl|canFam2|chr27 (39709755-39709564) | |
| 1683-1879, gnl|danRer3|chr15 (24958018-24958206) | |
| 1683-1879, gnl|dasNov1|scaffold_10192 (63886-63697) | |
| 1683-1879, gnl|echTel1|scaffold_287013 (5422-5613) | |
| 1683-1879, gnl|fr1|chrUn (304144021-304144212) | |
| 1683-1879, gnl|galGal2|chrUn (104533937-104534128) | |
| 1683-1879, gnl|hg17|chr12 (9123495-9123686) | |
| 1683-1879, gnl|Hg17|chr12 (9123698-9123500) | |
| 1683-1879, gnl|loxAfr1|scaffold_70747 (606-420) | |
| 1683-1879, gnl|mm7|chr6 (121694488-121694298) | |
| 1683-1879, gnl|Mm7|chr6 (121694284-121694482) | |
| 1683-1879, gnl|monDom2|scaffold_31 (11768852-11768663) | |
| 1683-1879, gnl|oryCun1|scaffold_214581 (56260-56069) | |
| 1683-1879, gnl|panTro1|chrUn_random (57977252-57977061) | |
| 1683-1879, gnl|rheMac2|chr11 (9223002-9223193) | |
| 1683-1879, gnl|rn3|chr4 (158385648-158385458) | |
| 1683-1879, gnl|tetNig1|chr16 (8120230-8120419) | |
| 1683-1879, gnl|xenTro1|scaffold_337 (595648-595463) | |
| 1965-2131, gnl|bosTau2|chr5 (61080208-61080373) | |
| 1965-2131, gnl|canFam2|chr27 (39711914-39711727) | |
| 1965-2131, gnl|danRer3|chr15 (24957576-24957747) | |
| 1965-2131, gnl|dasNov1|scaffold_32968 (12186-12373) | |
| 1965-2131, gnl|echTel1|scaffold_287013 (4042-4225) | |
| 1965-2131, gnl|fr1|chrUn (304143632-304143796) | |
| 1965-2131, gnl|galGal2|chrUn (104532792-104532976) | |
| 1965-2131, gnl|hg17|chr12 (9121548-9121734) | |
| 1965-2131, gnl|Hg17|chr12 (9121721-9121556) | |
| 1965-2131, gnl|loxAfr1|scaffold_420 (128358-128545) | |
| 1965-2131, gnl|mm7|chr6 (121695943-121695758) | |
| 1965-2131, gnl|Mm7|chr6 (121695769-121695933) | |
| 1965-2131, gnl|monDom2|scaffold_31 (11771959-11771771) | |
| 1965-2131, gnl|oryCun1|scaffold_214581 (57579-57393) | |
| 1965-2131, gnl|panTro1|chrUn_random (57979197-57979011) | |
| 1965-2131, gnl|rheMac2|chr11 (9221037-9221223) | |
| 1965-2131, gnl|rn3|chr4 (158386967-158386782) | |
| 1965-2131, gnl|tetNig1|chr16 (8119601-8119772) | |
| 1965-2131, gnl|xenTro1|scaffold_337 (597363-597184) | |
| 2185-2382, gnl|bosTau2|chr5 (61081721-61081918) | |
| 2185-2382, gnl|Hg17|chr12 (9120812-9120615) | |
| 2185-2382, gnl|Mm7|chr6 (121697147-121697344) | |
| 2600-2821, gnl|bosTau2|chr5 (61088366-61088587) | |
| 2600-2821, gnl|canFam2|chr27 (39717051-39716797) | |
| 2600-2821, gnl|danRer3|chr15 (24956050-24956286) | |
| 2600-2821, gnl|dasNov1|scaffold_32968 (6827-7081) | |
| 2600-2821, gnl|echTel1|scaffold_287701 (66458-66204) | |
| 2600-2821, gnl|fr1|chrUn (304142699-304142916) | |
| 2600-2821, gnl|galGal2|chrUn (104528761-104529013) | |
| 2600-2821, gnl|hg17|chr12 (9116507-9116765) | |
| 2600-2821, gnl|Hg17|chr12 (9116737-9116516) | |
| 2600-2821, gnl|loxAfr1|scaffold_129943 (2573-2827) | |
| 2600-2821, gnl|mm7|chr6 (121701216-121700966) | |
| 2600-2821, gnl|Mm7|chr6 (121700986-121701207) | |
| 2600-2821, gnl|monDom2|scaffold_31 (11778516-11778262) | |
| 2600-2821, gnl|oryCun1|scaffold_155197 (9207-8958) | |
| 2600-2821, gnl|panTro1|chrUn_random (57984232-57983974) | |
| 2600-2821, gnl|rheMac2|chr11 (9215694-9215952) | |
| 2600-2821, gnl|rn3|chr4 (158394181-158393938) | |
| 2600-2821, gnl|tetNig1|chr16 (8118637-8118857) | |
| 2600-2821, gnl|xenTro1|scaffold_337 (600523-600288) | |
| 3105-3215, gnl|bosTau2|chr5 (61092888-61092998) | |
| 3105-3215, gnl|Hg17|chr12 (9112707-9112597) | |
| 3105-3215, gnl|Mm7|chr6 (121704238-121704348) | |
| 3247-3379, gnl|bosTau2|chr5 (61093850-61093988) | |
| 3247-3379, gnl|Hg17|chr12 (9111707-9111583) | |
| 3247-3379, gnl|Mm7|chr6 (121705345-121705473) |
| Expressed library(ies): 32 entry(ies) | More info |
| Expressed library(ies): 32 entry(ies) | Help | Less info |
| sug (5.21894) | |
| cli (2.44499) | |
| lun (2.40783) | |
| clu (2.03398) | |
| bla (1.49217) | |
| amn (1.25313) | |
| tes (1.24688) | |
| cov (0.925069) | |
| ova (0.903926) | |
| liv (0.877706) | |
| gul (0.710353) | |
| fli (0.608643) | |
| eru (0.60024) | |
| aor (0.585823) | |
| nlu (0.575043) | |
| ute (0.531138) | |
| eli (0.455443) | |
| cag (0.302389) | |
| cte (0.29274) | |
| ret (0.257467) | |
| mgp (0.230681) | |
| mas (0.210305) | |
| sag (0.182715) | |
| rec (0.17307) | |
| cki (0.165235) | |
| nco (0.161734) | |
| pty (0.142714) | |
| lnt (0.142308) | |
| pla (0.133672) | |
| tra (0.123092) | |
| cly (0.120642) | |
| cty (0.10408) |
| Expressed library(ies): 32 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sug (5.21894) | |
| cli (2.44499) | |
| lun (2.40783) | |
| clu (2.03398) | |
| bla (1.49217) | |
| amn (1.25313) | |
| tes (1.24688) | |
| cov (0.925069) | |
| ova (0.903926) | |
| liv (0.877706) | |
| gul (0.710353) | |
| fli (0.608643) | |
| eru (0.60024) | |
| aor (0.585823) | |
| nlu (0.575043) | |
| ute (0.531138) | |
| eli (0.455443) | |
| cag (0.302389) | |
| cte (0.29274) | |
| ret (0.257467) | |
| mgp (0.230681) | |
| mas (0.210305) | |
| sag (0.182715) | |
| rec (0.17307) | |
| cki (0.165235) | |
| nco (0.161734) | |
| pty (0.142714) | |
| lnt (0.142308) | |
| pla (0.133672) | |
| tra (0.123092) | |
| cly (0.120642) | |
| cty (0.10408) |