Ss1.1-Pig3-SRG8025B18.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAACAAAGAAAAGCTGAACGTGGAGGCGGCCAACTGGGTGGTGAGAGGCCAGGAGGACT TCGCCTGGTTAGGATACTCTCTACACGGGGGCGATGTGAACAACGGGACCTTGCTGTTGG TTGGGAGCCCAACCTGGAAGAATGCCAGTAGTTTGGCCCATTTGTTCCGAACTCGGGATG AGAAACAGAGCCTGGGACGGGTGTATGGCTATTTCCCGCCAAACTGCCAAAGTTGGTTTA CCATGTCTGGAGACAAGGCAATGGGGAAACTAGGGACCTCCCTGTCAAGTGGCCACGTGA TGGTGAATGGGACCCGGACGCAAGTGCTGCTGGTTGGGGCTCCAACTCGAGATGACGTGT CTAAGGTGGCATTCCTGACCATGACCTTGCACCAGGGTGGAAGCACTTGGATGTATGAAC TGAAGCCTGACTCGCAGCCTTCTCTGCTCAGCACCTTTAGTGGAGACCGCCGCTTCTCCC GATTTGGTGGAGTTCTGCACTTGAGTGACCTGGACAATGATGGCTTAGATGAAGTCGTCA TTACAGCCTCATTGAGGATCACAGATGTCACCTCTGGACTGATGGGGGGAGAAGACGGCC GTGTTTACGTATATAATGGCAGACAGATCACCTTGGGAGACGTGACAGGCAAATGCAAAT CATGGATAACTCCATGTCCAGAAGAAAAGGCCCAATATGTACTGATTTCTCCTGAAGCAG GCTCCAGGTTTGGGAGCGCTGTGGTCACTGTGAGGTCAAAGACAAAGAACCAAATTGTTG TTGCTGCTGGAAGGAGTTCTCTGGGAGCCCGACTCTCTGGGGCGCTTCACATCTACAGCC TCGGCCAAGATTAAAGATGTCGTTCTACCTTCCTAGCCTGCCCCTCTCTCTCACGCCGAG TCATCTCCAGGGTGAGCGTTCTGGTGGACAAAGTGGCACATCCAGTGGACCCTGGTCGAT GCTACTGGAGGTGGGGCCCCTGTGAGTGGAGACACACACACTAACAGCCTGACCATCTGG AAAGAGGATACAGACAAGGGTGACATCATCAAAGTATGTGAAAGAGTGGATGCTCCGGTT ATGCATGTCCCCTTCCAAAGTTTACTTTCTGGCTTCCTTTGCCTCTAAGCTTACTCCTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAACAAAGAAAAGCTGAACGTGGAGGCGGCCAACTGGGTGGTGAGAGGCCAGGAGGACT TCGCCTGGTTAGGATACTCTCTACACGGGGGCGATGTGAACAACGGGACCTTGCTGTTGG TTGGGAGCCCAACCTGGAAGAATGCCAGTAGTTTGGCCCATTTGTTCCGAACTCGGGATG AGAAACAGAGCCTGGGACGGGTGTATGGCTATTTCCCGCCAAACTGCCAAAGTTGGTTTA CCATGTCTGGAGACAAGGCAATGGGGAAACTAGGGACCTCCCTGTCAAGTGGCCACGTGA TGGTGAATGGGACCCGGACGCAAGTGCTGCTGGTTGGGGCTCCAACTCGAGATGACGTGT CTAAGGTGGCATTCCTGACCATGACCTTGCACCAGGGTGGAAGCACTTGGATGTATGAAC TGAAGCCTGACTCGCAGCCTTCTCTGCTCAGCACCTTTAGTGGAGACCGCCGCTTCTCCC GATTTGGTGGAGTTCTGCACTTGAGTGACCTGGACAATGATGGCTTAGATGAAGTCGTCA TTACAGCCTCATTGAGGATCACAGATGTCACCTCTGGACTGATGGGGGGAGAAGACGGCC GTGTTTACGTATATAATGGCAGACAGATCACCTTGGGAGACGTGACAGGCAAATGCAAAT CATGGATAACTCCATGTCCAGAAGAAAAGGCCCAATATGTACTGATTTCTCCTGAAGCAG GCTCCAGGTTTGGGAGCGCTGTGGTCACTGTGAGGTCAAAGACAAAGAACCAAATTGTTG TTGCTGCTGGAAGGAGTTCTCTGGGAGCCCGACTCTCTGGGGCGCTTCACATCTACAGCC TCGGCCAAGATTAAAGATGTCGTTCTACCTTCCTAGCCTGCCCCTCTCTCTCACGCCGAG TCATCTCCAGGGTGAGCGTTCTGGTGGACAAAGTGGCACATCCAGTGGACCCTGGTCGAT GCTACTGGAGGTGGGGCCCCTGTGAGTGGAGACACACACACTAACAGCCTGACCATCTGG AAAGAGGATACAGACAAGGGTGACATCATCAAAGTATGTGAAAGAGTGGATGCTCCGGTT ATGCATGTCCCCTTCCAAAGTTTACTTTCTGGCTTCCTTTGCCTCTAAGCTTACTCCTCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
| 8-151, gnl|bosTau2|chr23 (26808187-26808330) | |
| 8-151, gnl|canFam2|chr35 (25523952-25524126) | |
| 8-151, gnl|echTel1|scaffold_305223 (15176-15004) | |
| 8-151, gnl|galGal2|chr2 (57658826-57658689) | |
| 8-151, gnl|hg17|chr6 (24555039-24555212) | |
| 8-151, gnl|Hg17|chr6 (24555188-24555045) | |
| 8-151, gnl|loxAfr1|scaffold_6204 (49981-50153) | |
| 8-151, gnl|mm7|chr13 (24346909-24346752) | |
| 8-151, gnl|Mm7|chr13 (24346757-24346900) | |
| 8-151, gnl|monDom2|scaffold_3 (114875829-114876006) | |
| 8-151, gnl|oryCun1|scaffold_188483 (13117-12945) | |
| 8-151, gnl|panTro1|chr5 (24990765-24990938) | |
| 8-151, gnl|rheMac2|chr4 (24453135-24453308) | |
| 8-151, gnl|rn3|chr17 (47157888-47158053) | |
| 8-151, gnl|xenTro1|scaffold_500 (113557-113405) | |
| 326-528, gnl|bosTau2|chr23 (26811801-26812002) | |
| 326-528, gnl|canFam2|chr35 (25516896-25517209) | |
| 326-528, gnl|dasNov1|scaffold_67847 (7650-7948) | |
| 326-528, gnl|echTel1|scaffold_301079 (21618-21915) | |
| 326-528, gnl|galGal2|chr2 (57661070-57660782) | |
| 326-528, gnl|hg17|chr6 (24545213-24545522) | |
| 326-528, gnl|Hg17|chr6 (24545516-24545320) | |
| 326-528, gnl|loxAfr1|scaffold_6204 (43919-44242) | |
| 326-528, gnl|mm7|chr13 (24350119-24349806) | |
| 326-528, gnl|Mm7|chr13 (24349810-24350009) | |
| 326-528, gnl|monDom2|scaffold_3 (114871774-114872047) | |
| 326-528, gnl|oryCun1|scaffold_188483 (20284-19977) | |
| 326-528, gnl|panTro1|chr5 (24980888-24981182) | |
| 326-528, gnl|rheMac2|chr4 (24444417-24444726) | |
| 326-528, gnl|rn3|chr17 (47154628-47154940) | |
| 766-1111, gnl|bosTau2|chr23 (26816778-26817113) | |
| 766-1111, gnl|canFam2|chr35 (25512272-25512468) | |
| 766-1111, gnl|dasNov1|scaffold_67847 (2505-2781) | |
| 766-1111, gnl|echTel1|scaffold_301079 (13462-13718) | |
| 766-1111, gnl|hg17|chr6 (24536950-24537250) | |
| 766-1111, gnl|Hg17|chr6 (24537327-24536973) | |
| 766-1111, gnl|loxAfr1|scaffold_6204 (36351-36656) | |
| 766-1111, gnl|mm7|chr13 (24356117-24355915) | |
| 766-1111, gnl|Mm7|chr13 (24355836-24356106) | |
| 766-1111, gnl|monDom2|scaffold_3 (114862641-114862910) | |
| 766-1111, gnl|oryCun1|scaffold_166969 (541-290) | |
| 766-1111, gnl|panTro1|chr5 (24971572-24971872) | |
| 766-1111, gnl|rheMac2|chr4 (24435427-24435729) | |
| 766-1111, gnl|rn3|chr17 (47148842-47149064) |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 8-151, gnl|bosTau2|chr23 (26808187-26808330) | |
| 8-151, gnl|canFam2|chr35 (25523952-25524126) | |
| 8-151, gnl|echTel1|scaffold_305223 (15176-15004) | |
| 8-151, gnl|galGal2|chr2 (57658826-57658689) | |
| 8-151, gnl|hg17|chr6 (24555039-24555212) | |
| 8-151, gnl|Hg17|chr6 (24555188-24555045) | |
| 8-151, gnl|loxAfr1|scaffold_6204 (49981-50153) | |
| 8-151, gnl|mm7|chr13 (24346909-24346752) | |
| 8-151, gnl|Mm7|chr13 (24346757-24346900) | |
| 8-151, gnl|monDom2|scaffold_3 (114875829-114876006) | |
| 8-151, gnl|oryCun1|scaffold_188483 (13117-12945) | |
| 8-151, gnl|panTro1|chr5 (24990765-24990938) | |
| 8-151, gnl|rheMac2|chr4 (24453135-24453308) | |
| 8-151, gnl|rn3|chr17 (47157888-47158053) | |
| 8-151, gnl|xenTro1|scaffold_500 (113557-113405) | |
| 326-528, gnl|bosTau2|chr23 (26811801-26812002) | |
| 326-528, gnl|canFam2|chr35 (25516896-25517209) | |
| 326-528, gnl|dasNov1|scaffold_67847 (7650-7948) | |
| 326-528, gnl|echTel1|scaffold_301079 (21618-21915) | |
| 326-528, gnl|galGal2|chr2 (57661070-57660782) | |
| 326-528, gnl|hg17|chr6 (24545213-24545522) | |
| 326-528, gnl|Hg17|chr6 (24545516-24545320) | |
| 326-528, gnl|loxAfr1|scaffold_6204 (43919-44242) | |
| 326-528, gnl|mm7|chr13 (24350119-24349806) | |
| 326-528, gnl|Mm7|chr13 (24349810-24350009) | |
| 326-528, gnl|monDom2|scaffold_3 (114871774-114872047) | |
| 326-528, gnl|oryCun1|scaffold_188483 (20284-19977) | |
| 326-528, gnl|panTro1|chr5 (24980888-24981182) | |
| 326-528, gnl|rheMac2|chr4 (24444417-24444726) | |
| 326-528, gnl|rn3|chr17 (47154628-47154940) | |
| 766-1111, gnl|bosTau2|chr23 (26816778-26817113) | |
| 766-1111, gnl|canFam2|chr35 (25512272-25512468) | |
| 766-1111, gnl|dasNov1|scaffold_67847 (2505-2781) | |
| 766-1111, gnl|echTel1|scaffold_301079 (13462-13718) | |
| 766-1111, gnl|hg17|chr6 (24536950-24537250) | |
| 766-1111, gnl|Hg17|chr6 (24537327-24536973) | |
| 766-1111, gnl|loxAfr1|scaffold_6204 (36351-36656) | |
| 766-1111, gnl|mm7|chr13 (24356117-24355915) | |
| 766-1111, gnl|Mm7|chr13 (24355836-24356106) | |
| 766-1111, gnl|monDom2|scaffold_3 (114862641-114862910) | |
| 766-1111, gnl|oryCun1|scaffold_166969 (541-290) | |
| 766-1111, gnl|panTro1|chr5 (24971572-24971872) | |
| 766-1111, gnl|rheMac2|chr4 (24435427-24435729) | |
| 766-1111, gnl|rn3|chr17 (47148842-47149064) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.239292) |