Non-Coding RNA Search

Ss1.1-Pig3-SRG8025D23.3

Sequence:


               
               TTCACACCTGCCAGGGACTTGCGTCTGCTTAATTTAGCTTTGCAAAAAGTTTCAGTGATA
TTTCCTTTTACAAAACACTAATCTTTCCGTGCACTTAATTAGCAAGATACAGATTTCAAG
AGACTCTCAACCTTGGGGGGAGGGGGTGTTTAAAAGTGAAATTCCTGGAGTCCAATAATA
AAAAAGCAATTTAGTAATTTGGGGCACATACTATTGTTAATATCTGTAAAAGGCAACACC
AGTATTTAGCTTGGGATTAAATACCTACTTTTTTTTCTACTATACCTCAAACTTACACTC
ACAGAGAAGACAGGTTCAACATCATAAGGAAGAGGAAATGTCAAGTTAGGCAGACGTGAG
ATGCACCTAGAAAAAGTTTTCCTAAGAATTTTATTTAGAATTGCCTACTCCAACTTTACT
GTTCATTTTTACTGTTCATCTTTATAGTACCCAACTTTGGAAAAATAACTTAACTTAGGC
TATTTTCCCATCATCTTGAATTTAACCATCACTGAAACTTGATGTTGAAAACTCCTGTAA
ATAATCCATAACCGTGTGTAACATTATCGTTTTTAAGTAAAATTGACCAGCCAAGTTTCT
ACAGTCTGCACAATTTTGTATCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCACACCTGCCAGGGACTTGCGTCTGCTTAATTTAGCTTTGCAAAAAGTTTCAGTGATA
TTTCCTTTTACAAAACACTAATCTTTCCGTGCACTTAATTAGCAAGATACAGATTTCAAG
AGACTCTCAACCTTGGGGGGAGGGGGTGTTTAAAAGTGAAATTCCTGGAGTCCAATAATA
AAAAAGCAATTTAGTAATTTGGGGCACATACTATTGTTAATATCTGTAAAAGGCAACACC
AGTATTTAGCTTGGGATTAAATACCTACTTTTTTTTCTACTATACCTCAAACTTACACTC
ACAGAGAAGACAGGTTCAACATCATAAGGAAGAGGAAATGTCAAGTTAGGCAGACGTGAG
ATGCACCTAGAAAAAGTTTTCCTAAGAATTTTATTTAGAATTGCCTACTCCAACTTTACT
GTTCATTTTTACTGTTCATCTTTATAGTACCCAACTTTGGAAAAATAACTTAACTTAGGC
TATTTTCCCATCATCTTGAATTTAACCATCACTGAAACTTGATGTTGAAAACTCCTGTAA
ATAATCCATAACCGTGTGTAACATTATCGTTTTTAAGTAAAATTGACCAGCCAAGTTTCT
ACAGTCTGCACAATTTTGTATCCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               12-624, gnl|bosTau2|chr13 (18077955-18078558)
               

               
               12-624, gnl|Hg17|chr10 (15598327-15597724)
               

               
               12-624, gnl|Mm7|chr2 (12047508-12046922)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-624, gnl|bosTau2|chr13 (18077955-18078558)
               

               
               12-624, gnl|Hg17|chr10 (15598327-15597724)
               

               
               12-624, gnl|Mm7|chr2 (12047508-12046922)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               gul (0.710353)
               

               
               mga (0.160205)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.710353)
               

               
               mga (0.160205)

	12-624, gnl\|bosTau2\|chr13 (18077955-18078558)
	12-624, gnl\|Hg17\|chr10 (15598327-15597724)
	12-624, gnl\|Mm7\|chr2 (12047508-12046922)