Ss1.1-Pig3-SRG8025H08.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGCACAGAGGAACTTTTAATGGGAAGGGGCAGCACCGTTAAAACACACGTGCACTTCGA AGGCGCCGGAGCCCTGTGGCCTCGGAACAGCCCCTGTGCCTGGGAGGGCCTCCCCAGACT CCCCGTGTGCAGAGCCGCCCCGATGCTCCGTCGCCATCTGACTCAGACGCGGCTCCACCG CGAGGCCGCGCCGGCCTGGCACTTCCTGCCATGTTCACGTCACCCGTCGGGGCGGGGCTC AACCTCCGTGGCACCGCAGCTCTGACGCCTCAGCACGTCCACCACCTGTCCTGGAGCGGC TGCCGCGGGTCCGTCAGCTGAAGTGAAGGAAGTCGCGGCCCTCCCGCAGATGCAGAGATC TCAGGTTGTCTTCAAACGCGCCGCCTGTGAGGTCCAGCTTCACGCAGATGACAAAGGGCG GCCGTGCGGCTCGGAAGTGCAGGACTGGGACCCGGGGCTTGGGCCTTTCCTGAGACTCCT CGTGGCAGTAGAAGCCCTTCTGGATCTTGTTCTCGTCCACGTCGCAGAAGGCGACCACCT TACGCCGTGACTCCGCCGTCAGGCTGCGGTAGAGCCGGCGGCCCTGCCGGCCCGCGTTCC AGATGGTGAAGGTCGCCCAGCGGGGCAGGGCCTGCTCCTCCAGGAAGCGGACGCGGAGGG TCCAGATGGTGGTCTCGAGGACGGCGTGTGTGGCAGCAGCGGGGTGGTAGCGGTACACGA GGAGGCTGCGGTCCACGCGGACGACCCCGCCGCCCTTCCTCAGGTGCTCGTAGAAGAATA GCAGGTCCTCCGGGACACCCCGGCCGCCCTCGTCAAACGGGCCCACGTGGGAGAACCAGG CTCGGGAGCAAAACCACGTGGGCATGGGCACCGTGGGGCCGTGGGAGGTGAACGCCTGGG TGAGCCCCTCGCCGGGCTCCAGATGGTTGAGCCACCGTGTGTACCGCTGGGTGGAGTTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGCACAGAGGAACTTTTAATGGGAAGGGGCAGCACCGTTAAAACACACGTGCACTTCGA AGGCGCCGGAGCCCTGTGGCCTCGGAACAGCCCCTGTGCCTGGGAGGGCCTCCCCAGACT CCCCGTGTGCAGAGCCGCCCCGATGCTCCGTCGCCATCTGACTCAGACGCGGCTCCACCG CGAGGCCGCGCCGGCCTGGCACTTCCTGCCATGTTCACGTCACCCGTCGGGGCGGGGCTC AACCTCCGTGGCACCGCAGCTCTGACGCCTCAGCACGTCCACCACCTGTCCTGGAGCGGC TGCCGCGGGTCCGTCAGCTGAAGTGAAGGAAGTCGCGGCCCTCCCGCAGATGCAGAGATC TCAGGTTGTCTTCAAACGCGCCGCCTGTGAGGTCCAGCTTCACGCAGATGACAAAGGGCG GCCGTGCGGCTCGGAAGTGCAGGACTGGGACCCGGGGCTTGGGCCTTTCCTGAGACTCCT CGTGGCAGTAGAAGCCCTTCTGGATCTTGTTCTCGTCCACGTCGCAGAAGGCGACCACCT TACGCCGTGACTCCGCCGTCAGGCTGCGGTAGAGCCGGCGGCCCTGCCGGCCCGCGTTCC AGATGGTGAAGGTCGCCCAGCGGGGCAGGGCCTGCTCCTCCAGGAAGCGGACGCGGAGGG TCCAGATGGTGGTCTCGAGGACGGCGTGTGTGGCAGCAGCGGGGTGGTAGCGGTACACGA GGAGGCTGCGGTCCACGCGGACGACCCCGCCGCCCTTCCTCAGGTGCTCGTAGAAGAATA GCAGGTCCTCCGGGACACCCCGGCCGCCCTCGTCAAACGGGCCCACGTGGGAGAACCAGG CTCGGGAGCAAAACCACGTGGGCATGGGCACCGTGGGGCCGTGGGAGGTGAACGCCTGGG TGAGCCCCTCGCCGGGCTCCAGATGGTTGAGCCACCGTGTGTACCGCTGGGTGGAGTTGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 293-395, gnl|bosTau2|chr19 (43937457-43937559) | |
| 293-395, gnl|Hg17|chr17 (78498047-78498149) | |
| 293-395, gnl|Mm7|chr11 (121728683-121728774) | |
| 529-711, gnl|bosTau2|chr19 (43945500-43945679) | |
| 529-711, gnl|canFam2|chrUn (12100634-12100802) | |
| 529-711, gnl|danRer3|chr8 (7338077-7337907) | |
| 529-711, gnl|echTel1|scaffold_288549 (44997-44828) | |
| 529-711, gnl|fr1|chrUn (277330044-277329896) | |
| 529-711, gnl|hg17|chr17 (78508513-78508685) | |
| 529-711, gnl|Hg17|chr17 (78508513-78508688) | |
| 529-711, gnl|mm7|chr11 (121733132-121733290) | |
| 529-711, gnl|Mm7|chr11 (121733128-121733278) | |
| 529-711, gnl|oryCun1|scaffold_42804 (226-379) | |
| 529-711, gnl|rheMac2|chr16 (78440166-78440338) | |
| 529-711, gnl|rn3|chrUn (6002554-6002395) | |
| 529-711, gnl|tetNig1|chr18 (1899054-1898879) | |
| 529-711, gnl|xenTro1|scaffold_2020 (12193-12335) | |
| 799-899, gnl|bosTau2|chr19 (43958989-43959089) | |
| 799-899, gnl|canFam2|chrUn (12107087-12107224) | |
| 799-899, gnl|dasNov1|scaffold_36942 (14901-15037) | |
| 799-899, gnl|fr1|chrUn (277328461-277328332) | |
| 799-899, gnl|hg17|chr17 (78516805-78516942) | |
| 799-899, gnl|Hg17|chr17 (78516815-78516915) | |
| 799-899, gnl|loxAfr1|scaffold_41161 (4098-4232) | |
| 799-899, gnl|mm7|chr11 (121739806-121739942) | |
| 799-899, gnl|Mm7|chr11 (121739816-121739916) | |
| 799-899, gnl|oryCun1|scaffold_108399 (11230-11362) | |
| 799-899, gnl|panTro1|chr19 (82327295-82327432) | |
| 799-899, gnl|rheMac2|chr16 (78454302-78454440) | |
| 799-899, gnl|rn3|chrUn (5995128-5994991) | |
| 799-899, gnl|tetNig1|chr18 (1897991-1897879) | |
| 799-899, gnl|xenTro1|scaffold_2020 (17630-17738) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 293-395, gnl|bosTau2|chr19 (43937457-43937559) | |
| 293-395, gnl|Hg17|chr17 (78498047-78498149) | |
| 293-395, gnl|Mm7|chr11 (121728683-121728774) | |
| 529-711, gnl|bosTau2|chr19 (43945500-43945679) | |
| 529-711, gnl|canFam2|chrUn (12100634-12100802) | |
| 529-711, gnl|danRer3|chr8 (7338077-7337907) | |
| 529-711, gnl|echTel1|scaffold_288549 (44997-44828) | |
| 529-711, gnl|fr1|chrUn (277330044-277329896) | |
| 529-711, gnl|hg17|chr17 (78508513-78508685) | |
| 529-711, gnl|Hg17|chr17 (78508513-78508688) | |
| 529-711, gnl|mm7|chr11 (121733132-121733290) | |
| 529-711, gnl|Mm7|chr11 (121733128-121733278) | |
| 529-711, gnl|oryCun1|scaffold_42804 (226-379) | |
| 529-711, gnl|rheMac2|chr16 (78440166-78440338) | |
| 529-711, gnl|rn3|chrUn (6002554-6002395) | |
| 529-711, gnl|tetNig1|chr18 (1899054-1898879) | |
| 529-711, gnl|xenTro1|scaffold_2020 (12193-12335) | |
| 799-899, gnl|bosTau2|chr19 (43958989-43959089) | |
| 799-899, gnl|canFam2|chrUn (12107087-12107224) | |
| 799-899, gnl|dasNov1|scaffold_36942 (14901-15037) | |
| 799-899, gnl|fr1|chrUn (277328461-277328332) | |
| 799-899, gnl|hg17|chr17 (78516805-78516942) | |
| 799-899, gnl|Hg17|chr17 (78516815-78516915) | |
| 799-899, gnl|loxAfr1|scaffold_41161 (4098-4232) | |
| 799-899, gnl|mm7|chr11 (121739806-121739942) | |
| 799-899, gnl|Mm7|chr11 (121739816-121739916) | |
| 799-899, gnl|oryCun1|scaffold_108399 (11230-11362) | |
| 799-899, gnl|panTro1|chr19 (82327295-82327432) | |
| 799-899, gnl|rheMac2|chr16 (78454302-78454440) | |
| 799-899, gnl|rn3|chrUn (5995128-5994991) | |
| 799-899, gnl|tetNig1|chr18 (1897991-1897879) | |
| 799-899, gnl|xenTro1|scaffold_2020 (17630-17738) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| cga (0.279096) | |
| col (0.195008) | |
| nep (0.183925) | |
| fbs (0.175346) | |
| pty (0.142714) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cga (0.279096) | |
| col (0.195008) | |
| nep (0.183925) | |
| fbs (0.175346) | |
| pty (0.142714) |